BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0280.1
(279 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 79 4e-18
>ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | ChrM:207553-207915 REVERSE
LENGTH=120 | 201606
Length = 120
Score = 78.6 bits (192), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 47/83 (56%)
Query: 86 MNRTLLERTRCMLSNAGLSEVVWAKAVKTTAYLVNISPCTFIEYKAPNEVWSSNSAKYEN 145
MNRT++E+ R ML GL + A A T +++N P T I + P+EVW + Y
Sbjct: 1 MNRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSY 60
Query: 146 LRIFSCPVYAHVKEGKLDPRAKK 168
LR F C Y H EGKL PRAKK
Sbjct: 61 LRRFGCVAYIHCDEGKLKPRAKK 83