BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0290.1
(357 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 169 4e-46
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 169 4e-46
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 94 6e-22
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 169 bits (427), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 109/337 (32%), Positives = 174/337 (51%), Gaps = 16/337 (4%)
Query: 23 SQGVYTTKGIDFNEVFSPIVNHSSIRVLDSIVALYDMELKQLDVKTAFLYGELEEQIYMR 82
++G +GIDF E FSP+ +S++++ +I A+Y+ L QLD+ AFL G+L+E+IYM+
Sbjct: 152 AKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMK 211
Query: 83 QPEGFKILGKE----DQVCLLKKSLYGLKQSPRQWYKRFDTFMVRNGYDRSKYDSYVYHK 138
P G+ + + VC LKKS+YGLKQ+ RQW+ +F ++ G+ +S D + Y
Sbjct: 212 LPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSD-HTYFL 270
Query: 139 KLSDSSNVYLLLYVDEMLIACKEMSEVHMLKDQLKGEFGMKNLRASWKTLGMEIRRVRSA 198
K++ + + +L+YVD+++I + V LK QLK F +++L LG+EI RSA
Sbjct: 271 KITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEI--ARSA 328
Query: 199 RKLFLSQKAYVEKGFEHFGMTEAKPVGTPLAAYFKLSGELSPTTDKETEYMSRVRYASAV 258
+ + Q+ Y + G+ KP P+ S +++ Y +
Sbjct: 329 AGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH------SGGDFVDAKAYRRLI 382
Query: 259 CSIMYAMVCIRPDISHAVSVVSSYMGRSGRGHWQAVKWILRYLGGTAEVGLVYDRRVDTF 318
+MY + R DIS AV+ +S + H QAV IL Y+ GT GL Y + +
Sbjct: 383 GRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQ 441
Query: 319 GSVVKFVDSDFSRHLDRQWSLTGYTFTLYGSAICWRT 355
V F D+ F D + S GY L S I W++
Sbjct: 442 LQV--FSDASFQSCKDTRRSTNGYCMFLGTSLISWKS 476
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 169 bits (427), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 109/337 (32%), Positives = 174/337 (51%), Gaps = 16/337 (4%)
Query: 23 SQGVYTTKGIDFNEVFSPIVNHSSIRVLDSIVALYDMELKQLDVKTAFLYGELEEQIYMR 82
++G +GIDF E FSP+ +S++++ +I A+Y+ L QLD+ AFL G+L+E+IYM+
Sbjct: 152 AKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMK 211
Query: 83 QPEGFKILGKE----DQVCLLKKSLYGLKQSPRQWYKRFDTFMVRNGYDRSKYDSYVYHK 138
P G+ + + VC LKKS+YGLKQ+ RQW+ +F ++ G+ +S D + Y
Sbjct: 212 LPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSD-HTYFL 270
Query: 139 KLSDSSNVYLLLYVDEMLIACKEMSEVHMLKDQLKGEFGMKNLRASWKTLGMEIRRVRSA 198
K++ + + +L+YVD+++I + V LK QLK F +++L LG+EI RSA
Sbjct: 271 KITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEI--ARSA 328
Query: 199 RKLFLSQKAYVEKGFEHFGMTEAKPVGTPLAAYFKLSGELSPTTDKETEYMSRVRYASAV 258
+ + Q+ Y + G+ KP P+ S +++ Y +
Sbjct: 329 AGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH------SGGDFVDAKAYRRLI 382
Query: 259 CSIMYAMVCIRPDISHAVSVVSSYMGRSGRGHWQAVKWILRYLGGTAEVGLVYDRRVDTF 318
+MY + R DIS AV+ +S + H QAV IL Y+ GT GL Y + +
Sbjct: 383 GRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQ 441
Query: 319 GSVVKFVDSDFSRHLDRQWSLTGYTFTLYGSAICWRT 355
V F D+ F D + S GY L S I W++
Sbjct: 442 LQV--FSDASFQSCKDTRRSTNGYCMFLGTSLISWKS 476
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 93.6 bits (231), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 12/208 (5%)
Query: 146 VYLLLYVDEMLIACKEMSEVHMLKDQLKGEFGMKNLRASWKTLGMEIRRVRSARKLFLSQ 205
+YLLLYVD++L+ + ++ML QL F MK+L LG++I+ S LFLSQ
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQ 58
Query: 206 KAYVEKGFEHFGMTEAKPVGTPLAAYFKLSGELSPTTDKETEYMSRVRYASAVCSIMYAM 265
Y E+ + GM + KP+ TPL KL+ +S +Y + S V ++ Y +
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPLP--LKLNSSVS-----TAKYPDPSDFRSIVGALQY-L 110
Query: 266 VCIRPDISHAVSVVSSYMGRSGRGHWQAVKWILRYLGGTAEVGLVYDRRVDTFGSVVKFV 325
RPDIS+AV++V M + +K +LRY+ GT GL + ++ +V F
Sbjct: 111 TLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHK--NSKLNVQAFC 168
Query: 326 DSDFSRHLDRQWSLTGYTFTLYGSAICW 353
DSD++ + S TG+ L + I W
Sbjct: 169 DSDWAGCTSTRRSTTGFCTFLGCNIISW 196