BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0310.1
(799 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 107 2e-23
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 107 2e-23
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 74 2e-14
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 129/300 (43%), Gaps = 42/300 (14%)
Query: 431 DRTIFENGGGSNLIFLVLYVDDILIVENNIPMLNSVKEWLRKCFSMKDLGDAEYILGIKI 490
D T F + + +++YVDDI+I NN ++ +K L+ CF ++DLG +Y LG++I
Sbjct: 265 DHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEI 324
Query: 491 YRDRSRKMIGLSQETYIDKILGRFKMEDSKRGFLPMTHGTTLIKTQCPRDPGELAYMKKV 550
RS I + Q Y +L + K +PM T G+ K
Sbjct: 325 --ARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTF----SAHSGGDFVDAKA- 377
Query: 551 HYASAIGSIMCAMVCTHPDVSYALSMCSRYQSNPGEKHWTAANNILKYLRRTKDHFLVYG 610
Y IG +M + T D+S+A++ S++ P H A IL Y++ T L Y
Sbjct: 378 -YRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYS 435
Query: 611 GKDELIVEGHVDARFQTDRDHFRSQS-------------------------------AAS 639
+ E+ ++ DA FQ+ +D RS + A S
Sbjct: 436 SQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALS 495
Query: 640 EAAKEGVWIKKFISELGVVPSIENGVTLYCDNNGAIAQAKEPRAHQKSKHILRKYHVIRE 699
A E +W+ +F EL + + L+CDN AI A H+++KHI H +RE
Sbjct: 496 FATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 129/300 (43%), Gaps = 42/300 (14%)
Query: 431 DRTIFENGGGSNLIFLVLYVDDILIVENNIPMLNSVKEWLRKCFSMKDLGDAEYILGIKI 490
D T F + + +++YVDDI+I NN ++ +K L+ CF ++DLG +Y LG++I
Sbjct: 265 DHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEI 324
Query: 491 YRDRSRKMIGLSQETYIDKILGRFKMEDSKRGFLPMTHGTTLIKTQCPRDPGELAYMKKV 550
RS I + Q Y +L + K +PM T G+ K
Sbjct: 325 --ARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTF----SAHSGGDFVDAKA- 377
Query: 551 HYASAIGSIMCAMVCTHPDVSYALSMCSRYQSNPGEKHWTAANNILKYLRRTKDHFLVYG 610
Y IG +M + T D+S+A++ S++ P H A IL Y++ T L Y
Sbjct: 378 -YRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYS 435
Query: 611 GKDELIVEGHVDARFQTDRDHFRSQS-------------------------------AAS 639
+ E+ ++ DA FQ+ +D RS + A S
Sbjct: 436 SQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALS 495
Query: 640 EAAKEGVWIKKFISELGVVPSIENGVTLYCDNNGAIAQAKEPRAHQKSKHILRKYHVIRE 699
A E +W+ +F EL + + L+CDN AI A H+++KHI H +RE
Sbjct: 496 FATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 73.9 bits (180), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 91/182 (50%), Gaps = 14/182 (7%)
Query: 444 IFLVLYVDDILIVENNIPMLNSVKEWLRKCFSMKDLGDAEYILGIKIYRDRSRKMIGLSQ 503
++L+LYVDDIL+ ++ +LN + L FSMKDLG Y LGI+I S + LSQ
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQ 58
Query: 504 ETYIDKILGRFKMEDSK--RGFLPMTHGTTLIKTQCPRDPGELAYMKKVHYASAIGSIMC 561
Y ++IL M D K LP+ +++ + P DP + + S +G++
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP-DPSD--------FRSIVGALQ- 108
Query: 562 AMVCTHPDVSYALSMCSRYQSNPGEKHWTAANNILKYLRRTKDHFLVYGGKDELIVEGHV 621
+ T PD+SYA+++ + P + +L+Y++ T H L +L V+
Sbjct: 109 YLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFC 168
Query: 622 DA 623
D+
Sbjct: 169 DS 170