BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0400.1
(123 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G42170.1 | BED zinc finger and hAT dimerization domain-contai... 70 7e-15
AT3G42170.2 | BED zinc finger and hAT dimerization domain-contai... 70 7e-15
AT1G18560.1 | BED zinc finger and hAT dimerization domain-contai... 47 7e-07
>AT3G42170.1 | BED zinc finger and hAT dimerization
domain-containing protein DAYSLEEPER |
Chr3:14321838-14323928 FORWARD LENGTH=696 | 201606
Length = 696
Score = 70.1 bits (170), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 47/69 (68%)
Query: 22 IEKFDVLSWWSENEKRYPFLSWIARDDLAVSVSTVASESAFSLGKRSLGDYRSSLTPEML 81
+++FDVL WW +N+ +YP LS +ARD L++ VS A + F + R + +Y++SL PE +
Sbjct: 605 VQEFDVLDWWKQNKLKYPTLSKMARDILSIPVSAAAFDYVFDMEPREMDEYKTSLRPETV 664
Query: 82 ECCVCLKDW 90
E +C ++W
Sbjct: 665 EALICAREW 673
>AT3G42170.2 | BED zinc finger and hAT dimerization
domain-containing protein DAYSLEEPER |
Chr3:14321838-14323928 FORWARD LENGTH=674 | 201606
Length = 674
Score = 70.1 bits (170), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 47/69 (68%)
Query: 22 IEKFDVLSWWSENEKRYPFLSWIARDDLAVSVSTVASESAFSLGKRSLGDYRSSLTPEML 81
+++FDVL WW +N+ +YP LS +ARD L++ VS A + F + R + +Y++SL PE +
Sbjct: 583 VQEFDVLDWWKQNKLKYPTLSKMARDILSIPVSAAAFDYVFDMEPREMDEYKTSLRPETV 642
Query: 82 ECCVCLKDW 90
E +C ++W
Sbjct: 643 EALICAREW 651
>AT1G18560.1 | BED zinc finger and hAT dimerization
domain-containing protein | Chr1:6385614-6388005 FORWARD
LENGTH=690 | 201606
Length = 690
Score = 47.0 bits (110), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 6 EEISRYESEPDPSIDNIEKFDVLSWWSENEKRYPFLSWIARDDLAVSVSTVASESAFSLG 65
+E+++Y SE SI ++ DVL WW N RYP LS +ARD LAV ++ A E F
Sbjct: 568 DELTQYLSE---SIVPMQT-DVLDWWKVNSGRYPRLSNMARDFLAVQATSAAPEEIFCGK 623
Query: 66 KRSLGDYRSSLTPEMLECCVCLKDW 90
+ + + + + +C++ W
Sbjct: 624 GEEIDKQKYCMPHDSTQSVICIRSW 648