BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0420.1
(83 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G03960.1 | TCP-1/cpn60 chaperonin family protein | Chr3:10244... 119 4e-33
>AT3G03960.1 | TCP-1/cpn60 chaperonin family protein |
Chr3:1024432-1027604 FORWARD LENGTH=549 | 201606
Length = 549
Score = 119 bits (298), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 62/74 (83%)
Query: 1 MEIISSLYAENAAGNTKVGIDLEEGACKDSSTMDIWDLHVTKFFALKYAADAVCTVLRVD 60
MEII++LY + +GNTK+GIDLEEGACKD S +WDL TK FALKYA+DA CTVLRVD
Sbjct: 464 MEIIAALYTGHGSGNTKLGIDLEEGACKDVSETKVWDLFATKLFALKYASDAACTVLRVD 523
Query: 61 QIIMAKQAGGPRRE 74
QIIMAK AGGPRR+
Sbjct: 524 QIIMAKPAGGPRRD 537