BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000117.1_g0440.1
         (746 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like...    52   9e-08
ATMG00300.1 | Gag-Pol-related retrotransposon family protein | C...    47   6e-06

>ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like
           superfamily protein | ChrM:207553-207915 REVERSE
           LENGTH=120 | 201606
          Length = 120

 Score = 52.0 bits (123), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 3/83 (3%)

Query: 538 NRQITSVGNTLLIKASMPKYFWFHAYDTTTYLINRTPTKVLSYLTPYEVLFGQTPDYSML 597
           NR I     ++L +  +PK F   A +T  ++IN+ P+  +++  P EV F   P YS L
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 598 KVFGSMCYPYLGDVKSDKLSPRS 620
           + FG + Y +  +    KL PR+
Sbjct: 62  RRFGCVAYIHCDE---GKLKPRA 81


>ATMG00300.1 | Gag-Pol-related retrotransposon family protein |
           ChrM:89617-90054 REVERSE LENGTH=145 | 201606
          Length = 145

 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 20/72 (27%), Positives = 37/72 (51%)

Query: 372 KTWHERLGHPSKKIIMSLERDKRIKLSSRDFMTLCSSCQLSKSHKLPFASSESSTTGPHE 431
           + WH RL H S++ +  L +   +  S    +  C  C   K+H++ F++ + +T  P +
Sbjct: 70  RLWHSRLAHMSQRGMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLD 129

Query: 432 LIHCDIWGPSPV 443
            +H D+WG   V
Sbjct: 130 YVHSDLWGAPSV 141


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