BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0460.1
(163 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 140 8e-42
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 103 7e-26
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 103 7e-26
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 47 5e-07
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 140 bits (352), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 99/153 (64%), Gaps = 1/153 (0%)
Query: 11 LIFLLYVDDIILTGSSMDLIHKLVSALGCEFAMKQLGSLHYFFRIEVIAHGSSLILTQTK 70
+ LLYVDDI+LTGSS L++ L+ L F+MK LG +HYF I++ H S L L+QTK
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 71 YITELLHNSELLDSKPSVIPVSSGKRASKFDGEPIDNPLFFRSMVGGLQYATMTRPDIAF 130
Y ++L+N+ +LD KP P+ K S +P FRS+VG LQY T+TRPDI++
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPL-KLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 119
Query: 131 AVNYLAQFMQGPSFTHLILLKKVLRYLKGTLGH 163
AVN + Q M P+ LLK+VLRY+KGT+ H
Sbjct: 120 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFH 152
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 103 bits (256), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 84/153 (54%)
Query: 11 LIFLLYVDDIILTGSSMDLIHKLVSALGCEFAMKQLGSLHYFFRIEVIAHGSSLILTQTK 70
L L+YVDDII+ ++ + +L S L F ++ LG L YF +E+ + + + Q K
Sbjct: 278 LCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRK 337
Query: 71 YITELLHNSELLDSKPSVIPVSSGKRASKFDGEPIDNPLFFRSMVGGLQYATMTRPDIAF 130
Y +LL + LL KPS +P+ S G + +R ++G L Y +TR DI+F
Sbjct: 338 YALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISF 397
Query: 131 AVNYLAQFMQGPSFTHLILLKKVLRYLKGTLGH 163
AVN L+QF + P H + K+L Y+KGT+G
Sbjct: 398 AVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQ 430
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 103 bits (256), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 84/153 (54%)
Query: 11 LIFLLYVDDIILTGSSMDLIHKLVSALGCEFAMKQLGSLHYFFRIEVIAHGSSLILTQTK 70
L L+YVDDII+ ++ + +L S L F ++ LG L YF +E+ + + + Q K
Sbjct: 278 LCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRK 337
Query: 71 YITELLHNSELLDSKPSVIPVSSGKRASKFDGEPIDNPLFFRSMVGGLQYATMTRPDIAF 130
Y +LL + LL KPS +P+ S G + +R ++G L Y +TR DI+F
Sbjct: 338 YALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISF 397
Query: 131 AVNYLAQFMQGPSFTHLILLKKVLRYLKGTLGH 163
AVN L+QF + P H + K+L Y+KGT+G
Sbjct: 398 AVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQ 430
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 46.6 bits (109), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 120 YATMTRPDIAFAVNYLAQFMQGPSFTHLILLKKVLRYLKGTLGH 163
Y T+TRPD+ FAVN L+QF + + KVL Y+KGT+G
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQ 45