BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0510.1
(738 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 516 e-170
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 516 e-170
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 192 2e-56
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 107 1e-26
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 63 1e-11
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 516 bits (1329), Expect = e-170, Method: Compositional matrix adjust.
Identities = 264/568 (46%), Positives = 359/568 (63%), Gaps = 39/568 (6%)
Query: 207 RSRRPPSHLDDYVCSNTNTIK-YLLENYFSINSFSNSHQQFLSSVLSTTEPTSFTQAMKS 265
R R P++L DY C + ++ + + + S S + FL + EP+++ +A +
Sbjct: 36 RRTRKPAYLQDYYCHSVASLTIHDISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEF 95
Query: 266 PHWKEAMAKEISALEENKTWTITVLPSGKKPIGCKWVYKIKFKSDGSIERYKARLVAKGY 325
W AM EI A+E TW I LP KKPIGCKWVYKIK+ SDG+IERYKARLVAKGY
Sbjct: 96 LVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGY 155
Query: 326 TQIEGLDYNDTFAPVAKLVTVRVLLSLAAIKGWSLHQLDVNNAFLQGDLNEEVYMKLPPG 385
TQ EG+D+ +TF+PV KL +V+++L+++AI ++LHQLD++NAFL GDL+EE+YMKLPPG
Sbjct: 156 TQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPG 215
Query: 386 FSS-QGES----KVCRLHKSLYGLKQASRQWFSKFSSVLIERGFSQSKSDYSFFTFRSHS 440
+++ QG+S VC L KS+YGLKQASRQWF KFS LI GF QS SD+++F + +
Sbjct: 216 YAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITAT 275
Query: 441 TQIYVLVYVDDIIITGNNDHAISQLKIFLNKAFSLKDLGRLQYFLGIEVSRSSQGIFLCQ 500
+ VLVYVDDIII NND A+ +LK L F L+DLG L+YFLG+E++RS+ GI +CQ
Sbjct: 276 LFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQ 335
Query: 501 RKYALDILKDSGLTAARPSEFPMEQKLRLSPTDGTPLPDPSVYRRLIGRLLYLTVTRPDI 560
RKYALD+L ++GL +PS PM+ + S G D YRRLIGRL+YL +TR DI
Sbjct: 336 RKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDI 395
Query: 561 TFA---------------------------GTLNKGVFLSANSSLHITGYCDSDWAGCPS 593
+FA GT+ +G+F S+ + + + + D+ + C
Sbjct: 396 SFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKD 455
Query: 594 TRRSTTGYFTMLGSSPLPWKSKKQPTVAKSSAEAEYRALAILTCELQWLKYLLLDFGIDH 653
TRRST GY LG+S + WKSKKQ V+KSSAEAEYRAL+ T E+ WL + +
Sbjct: 456 TRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPL 515
Query: 654 SDPMTVYCDNRAALHIADNPVFHERTKHIEIDCHIVREK-IKDNVIATRFTSTENQLADI 712
S P ++CDN AA+HIA N VFHERTKHIE DCH VRE+ + ++ F + + Q D
Sbjct: 516 SKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DG 573
Query: 713 FTK---PLGAEPFKNIIGKLGVTSIPAL 737
FT+ P+ I+ G+ + AL
Sbjct: 574 FTEYLSPILRGTIMYIVSMFGLAGLEAL 601
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 516 bits (1329), Expect = e-170, Method: Compositional matrix adjust.
Identities = 264/568 (46%), Positives = 359/568 (63%), Gaps = 39/568 (6%)
Query: 207 RSRRPPSHLDDYVCSNTNTIK-YLLENYFSINSFSNSHQQFLSSVLSTTEPTSFTQAMKS 265
R R P++L DY C + ++ + + + S S + FL + EP+++ +A +
Sbjct: 36 RRTRKPAYLQDYYCHSVASLTIHDISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEF 95
Query: 266 PHWKEAMAKEISALEENKTWTITVLPSGKKPIGCKWVYKIKFKSDGSIERYKARLVAKGY 325
W AM EI A+E TW I LP KKPIGCKWVYKIK+ SDG+IERYKARLVAKGY
Sbjct: 96 LVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGY 155
Query: 326 TQIEGLDYNDTFAPVAKLVTVRVLLSLAAIKGWSLHQLDVNNAFLQGDLNEEVYMKLPPG 385
TQ EG+D+ +TF+PV KL +V+++L+++AI ++LHQLD++NAFL GDL+EE+YMKLPPG
Sbjct: 156 TQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPG 215
Query: 386 FSS-QGES----KVCRLHKSLYGLKQASRQWFSKFSSVLIERGFSQSKSDYSFFTFRSHS 440
+++ QG+S VC L KS+YGLKQASRQWF KFS LI GF QS SD+++F + +
Sbjct: 216 YAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITAT 275
Query: 441 TQIYVLVYVDDIIITGNNDHAISQLKIFLNKAFSLKDLGRLQYFLGIEVSRSSQGIFLCQ 500
+ VLVYVDDIII NND A+ +LK L F L+DLG L+YFLG+E++RS+ GI +CQ
Sbjct: 276 LFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQ 335
Query: 501 RKYALDILKDSGLTAARPSEFPMEQKLRLSPTDGTPLPDPSVYRRLIGRLLYLTVTRPDI 560
RKYALD+L ++GL +PS PM+ + S G D YRRLIGRL+YL +TR DI
Sbjct: 336 RKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDI 395
Query: 561 TFA---------------------------GTLNKGVFLSANSSLHITGYCDSDWAGCPS 593
+FA GT+ +G+F S+ + + + + D+ + C
Sbjct: 396 SFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKD 455
Query: 594 TRRSTTGYFTMLGSSPLPWKSKKQPTVAKSSAEAEYRALAILTCELQWLKYLLLDFGIDH 653
TRRST GY LG+S + WKSKKQ V+KSSAEAEYRAL+ T E+ WL + +
Sbjct: 456 TRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPL 515
Query: 654 SDPMTVYCDNRAALHIADNPVFHERTKHIEIDCHIVREK-IKDNVIATRFTSTENQLADI 712
S P ++CDN AA+HIA N VFHERTKHIE DCH VRE+ + ++ F + + Q D
Sbjct: 516 SKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DG 573
Query: 713 FTK---PLGAEPFKNIIGKLGVTSIPAL 737
FT+ P+ I+ G+ + AL
Sbjct: 574 FTEYLSPILRGTIMYIVSMFGLAGLEAL 601
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 192 bits (489), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 138/226 (61%), Gaps = 28/226 (12%)
Query: 443 IYVLVYVDDIIITGNNDHAISQLKIFLNKAFSLKDLGRLQYFLGIEVSRSSQGIFLCQRK 502
+Y+L+YVDDI++TG+++ ++ L L+ FS+KDLG + YFLGI++ G+FL Q K
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 503 YALDILKDSGLTAARPSEFPMEQKLRLSPTDGTPLPDPSVYRRLIGRLLYLTVTRPDITF 562
YA IL ++G+ +P P+ KL S PDPS +R ++G L YLT+TRPDI++
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 119
Query: 563 A---------------------------GTLNKGVFLSANSSLHITGYCDSDWAGCPSTR 595
A GT+ G+++ NS L++ +CDSDWAGC STR
Sbjct: 120 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 179
Query: 596 RSTTGYFTMLGSSPLPWKSKKQPTVAKSSAEAEYRALAILTCELQW 641
RSTTG+ T LG + + W +K+QPTV++SS E EYRALA+ EL W
Sbjct: 180 RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 107 bits (267), Expect = 1e-26, Method: Composition-based stats.
Identities = 49/109 (44%), Positives = 73/109 (66%), Gaps = 3/109 (2%)
Query: 248 SSVLSTT---EPTSFTQAMKSPHWKEAMAKEISALEENKTWTITVLPSGKKPIGCKWVYK 304
S ++TT EP S A+K P W +AM +E+ AL NKTW + P + +GCKWV+K
Sbjct: 17 SLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFK 76
Query: 305 IKFKSDGSIERYKARLVAKGYTQIEGLDYNDTFAPVAKLVTVRVLLSLA 353
K SDG+++R KARLVAKG+ Q EG+ + +T++PV + T+R +L++A
Sbjct: 77 TKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 62.8 bits (151), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 27/82 (32%)
Query: 551 LYLTVTRPDITFA---------------------------GTLNKGVFLSANSSLHITGY 583
+YLT+TRPD+TFA GT+ +G+F SA S L + +
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 584 CDSDWAGCPSTRRSTTGYFTML 605
DSDWA CP TRRS TG+ +++
Sbjct: 61 ADSDWASCPDTRRSVTGFCSLV 82