BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000117.1_g0530.1
         (291 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G29750.1 | Eukaryotic aspartyl protease family protein | Chr3...    55   2e-08
AT3G30770.1 | Eukaryotic aspartyl protease family protein | Chr3...    45   5e-05

>AT3G29750.1 | Eukaryotic aspartyl protease family protein |
           Chr3:11579125-11580600 REVERSE LENGTH=421 | 201606
          Length = 421

 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 7/111 (6%)

Query: 25  MKVQGEIERAQVIVLIDSGSTHNFIDASIPKKLGIKIVLENSFEVMVADGSRIACAGQCV 84
           M+  G I   +V+V IDSG+T NFI   +   L +   + N   V++     I   G C+
Sbjct: 124 MRFYGFILDHKVVVAIDSGATDNFILVELAFSLKLPTSITNQASVLLGQRQCIQSVGTCL 183

Query: 85  NLEYKINQYAFTGNFYILKLG--GCDMVLGVSWLQTLGP--ITW---DFKY 128
            +   + +   T NF +L L     D++LG  WL  LG   + W   DF +
Sbjct: 184 GIRLWVQEVEITENFLLLDLAKTDVDVILGYEWLSKLGETMVNWQNQDFSF 234


>AT3G30770.1 | Eukaryotic aspartyl protease family protein |
           Chr3:12445493-12448085 FORWARD LENGTH=603 | 201606
          Length = 603

 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 10/147 (6%)

Query: 25  MKVQGEIERAQVIVLIDSGSTHNFIDASIPKKLGIKIVLENSFEVMVADGSRIACAGQCV 84
           M+  G I   +V+V+IDSG+T+NFI   +   L +     N   V++     I   G C 
Sbjct: 284 MRFYGFISCHKVVVVIDSGATNNFISDELALVLKLPTSTTNQASVLLGQRQCIQTIGTCF 343

Query: 85  NLEYKINQYAFTGNFYILKL--GGCDMVLGVSWLQTLGP--ITW---DFKYLTMK--FTV 135
            +   + +     NF +L L     D++LG    Q L    + W   DF +   +   T+
Sbjct: 344 GINLLVQEVEINENFLLLDLTKTDVDVILGYGGSQNLERQWLIWLNQDFSFFHNQQWVTL 403

Query: 136 RGKKFSLEGVRGRKVKTVSSHAMQRLD 162
             K   LE V   KVK  S +  +++D
Sbjct: 404 CAKDKELEQVT-TKVKMKSEYEQEKID 429


Top