BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0540.1
(230 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G42723.1 | ATP binding / aminoacyl-tRNA ligase/ nucleotide bi... 49 2e-06
>AT3G42723.1 | ATP binding / aminoacyl-tRNA ligase/ nucleotide
binding protein | Chr3:14838392-14841189 REVERSE
LENGTH=818 | 201606
Length = 818
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 4/151 (2%)
Query: 73 DTAQNQKIQFAISYLDGKTLQWYRWARRGNYFRSWEEFVEAVVGRFGRTMYEDAGAALAK 132
+ + +++Q S L+G QW + + N SW+EF + TM + +
Sbjct: 286 NIPEQERLQIVYSNLEGDIGQWIKHLWKKNSPTSWKEFKCMMARETKTTMKVNHQPHYSG 345
Query: 133 LRQTGSYIEYQEEFERLSNMVNDLPDSFVMSCFMSGLKDEVRLETKSFNPVNLHDAMSIA 192
++Q GS EY+E FE L LP + + F+ GL+ ++ + P + M A
Sbjct: 346 IQQEGSVREYRERFEALCLGSVILPGQGLEALFLQGLQPSLQTAVRELKPNGIVQMMDTA 405
Query: 193 R-LQDEKVYLRHQSYIDI-TRPK--PFINAE 219
+ L++ + + S + + T PK P AE
Sbjct: 406 QWLEESNSLMVYGSGLSVQTEPKVYPTTQAE 436