BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0620.1
(134 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G20860.1 | FAD-binding Berberine family protein | Chr4:111727... 168 2e-50
AT5G44360.1 | FAD-binding Berberine family protein | Chr5:178721... 163 1e-48
AT5G44360.2 | FAD-binding Berberine family protein | Chr5:178721... 163 2e-48
AT5G44400.1 | FAD-binding Berberine family protein | Chr5:178863... 155 1e-45
AT5G44390.1 | FAD-binding Berberine family protein | Chr5:178823... 144 2e-41
>AT4G20860.1 | FAD-binding Berberine family protein |
Chr4:11172726-11174318 FORWARD LENGTH=530 | 201606
Length = 530
Score = 168 bits (425), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 75/136 (55%), Positives = 99/136 (72%), Gaps = 2/136 (1%)
Query: 1 MLKENEVYVIIDPSGAKMGQISEAEIAFPHRKGNL--VQYIVKWKEGGDEASKKHIKWMN 58
L+++ +I +P G K+ +ISE E +PHR+GNL +QY+VKWK E KH++WM
Sbjct: 394 FLEQDTPLMIFEPLGGKISKISETESPYPHRRGNLYNIQYMVKWKVNEVEEMNKHVRWMR 453
Query: 59 SLYKYMTPYVSSSPRAAYVNYRDIDLGKNEAANTTYLQASLWGKKYFKSNFRRLALVKRQ 118
SL+ YMTPYVS SPR AY+NYRD+DLG + NT++ A WG+ YFK NF+RL LVK +
Sbjct: 454 SLHDYMTPYVSKSPRGAYLNYRDLDLGSTKGINTSFEDARKWGETYFKGNFKRLGLVKGK 513
Query: 119 VDPENYFRNEQSIPPL 134
+DP N+FRNEQSIPPL
Sbjct: 514 IDPTNFFRNEQSIPPL 529
>AT5G44360.1 | FAD-binding Berberine family protein |
Chr5:17872100-17873698 REVERSE LENGTH=532 | 201606
Length = 532
Score = 163 bits (412), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 72/128 (56%), Positives = 95/128 (74%), Gaps = 2/128 (1%)
Query: 9 VIIDPSGAKMGQISEAEIAFPHRKGNL--VQYIVKWKEGGDEASKKHIKWMNSLYKYMTP 66
+I++P G KM +I E E FPHR+GNL +QY+VKW+ +KH+ WM LY+YM
Sbjct: 403 MIMEPLGGKMYEIGETETPFPHRRGNLYNIQYMVKWRLKDIGVMEKHVTWMRLLYRYMRV 462
Query: 67 YVSSSPRAAYVNYRDIDLGKNEAANTTYLQASLWGKKYFKSNFRRLALVKRQVDPENYFR 126
YVS+SPR AY+NYRD+DLG N NT++ A LWG +YF SNF+RLA+VK ++DP N+FR
Sbjct: 463 YVSASPRGAYLNYRDLDLGMNRGVNTSFEDAKLWGFRYFGSNFKRLAIVKGKIDPTNFFR 522
Query: 127 NEQSIPPL 134
NEQS+PPL
Sbjct: 523 NEQSVPPL 530
>AT5G44360.2 | FAD-binding Berberine family protein |
Chr5:17872100-17873746 REVERSE LENGTH=548 | 201606
Length = 548
Score = 163 bits (413), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 72/128 (56%), Positives = 95/128 (74%), Gaps = 2/128 (1%)
Query: 9 VIIDPSGAKMGQISEAEIAFPHRKGNL--VQYIVKWKEGGDEASKKHIKWMNSLYKYMTP 66
+I++P G KM +I E E FPHR+GNL +QY+VKW+ +KH+ WM LY+YM
Sbjct: 419 MIMEPLGGKMYEIGETETPFPHRRGNLYNIQYMVKWRLKDIGVMEKHVTWMRLLYRYMRV 478
Query: 67 YVSSSPRAAYVNYRDIDLGKNEAANTTYLQASLWGKKYFKSNFRRLALVKRQVDPENYFR 126
YVS+SPR AY+NYRD+DLG N NT++ A LWG +YF SNF+RLA+VK ++DP N+FR
Sbjct: 479 YVSASPRGAYLNYRDLDLGMNRGVNTSFEDAKLWGFRYFGSNFKRLAIVKGKIDPTNFFR 538
Query: 127 NEQSIPPL 134
NEQS+PPL
Sbjct: 539 NEQSVPPL 546
>AT5G44400.1 | FAD-binding Berberine family protein |
Chr5:17886365-17888071 REVERSE LENGTH=537 | 201606
Length = 537
Score = 155 bits (392), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 74/137 (54%), Positives = 98/137 (71%), Gaps = 4/137 (2%)
Query: 1 MLKENEVYVIIDPSGAKMGQISEAEIAFPHRKGNL--VQYIVKWKEGGDEASKKHIKWMN 58
+LKE+ +I +P G M +I E++I FPHRKG L VQY+ W + D+ +HI W+
Sbjct: 401 LLKEDIPLMIWNPYGGMMAKIPESQIPFPHRKGVLFKVQYVTSWLDS-DKRPSRHINWIR 459
Query: 59 SLYKYMTPYVSSSPRAAYVNYRDIDLGKN-EAANTTYLQASLWGKKYFKSNFRRLALVKR 117
LY YMTPYVSS+PR AYVNYRD+DLG+N + T QA +WG YFK+NF RL ++K
Sbjct: 460 DLYSYMTPYVSSNPREAYVNYRDLDLGRNTKDVKTCIKQAQVWGANYFKNNFNRLMMIKA 519
Query: 118 QVDPENYFRNEQSIPPL 134
+VDPEN+FR+EQSIPP+
Sbjct: 520 KVDPENFFRHEQSIPPM 536
>AT5G44390.1 | FAD-binding Berberine family protein |
Chr5:17882329-17884906 REVERSE LENGTH=542 | 201606
Length = 542
Score = 144 bits (363), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 95/137 (69%), Gaps = 4/137 (2%)
Query: 1 MLKENEVYVIIDPSGAKMGQISEAEIAFPHRKGN--LVQYIVKWKEGGDEASKKHIKWMN 58
+L+E+ VI P G KM +I E+EI FPHR G ++QY W + ++ + KW+
Sbjct: 405 LLEEDAALVIWTPYGGKMDKIPESEIPFPHRNGTNFMIQYYRSWSDS-EKRPNRRTKWIR 463
Query: 59 SLYKYMTPYVSSSPRAAYVNYRDIDLGKN-EAANTTYLQASLWGKKYFKSNFRRLALVKR 117
LY YMTPYVSS+PR AYVNYRD+DLG+N + + + +++A +WG YFK NF RL +K
Sbjct: 464 ELYGYMTPYVSSNPRQAYVNYRDLDLGQNKDNSKSNFIEAKIWGANYFKDNFNRLVRIKS 523
Query: 118 QVDPENYFRNEQSIPPL 134
+VDP+N+FR+EQSIP L
Sbjct: 524 KVDPDNFFRHEQSIPTL 540