BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000117.1_g0630.1
         (730 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G00980.1 | zinc knuckle (CCHC-type) family protein | Chr4:422...   129   2e-31
ATMG00300.1 | Gag-Pol-related retrotransposon family protein | C...    56   6e-09

>AT4G00980.1 | zinc knuckle (CCHC-type) family protein |
           Chr4:422732-424580 REVERSE LENGTH=488 | 201606
          Length = 488

 Score =  129 bits (325), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 147/292 (50%), Gaps = 16/292 (5%)

Query: 9   KPEKFDGQNFKRWQQKMLFFLTTLNINYVLTEPATTVVGENEP-------GRSGAV-EAW 60
           K  +FDG+++  W  +M  FL  L + YVL+EP  ++     P        R+ A  + W
Sbjct: 194 KISRFDGKSYLYWASQMELFLKQLKLTYVLSEPCPSIGSSQGPETNPREITRADATGKKW 253

Query: 61  NKADYLCRNYILNCLDNILYDIYCHT-KTAKELWDSLQEKYISEDASIKKFVVRRFLDYK 119
            + DYLC  +++N L + LY  Y    K AKELWD L+  Y  +++  K+  VR++++++
Sbjct: 254 LRDDYLCYTHLMNSLSDHLYRRYSQKFKHAKELWDELKWVYQCDESKSKRSQVRKYIEFR 313

Query: 120 MEDEKSVVSQFQELRLIPNEIKTGGMVIDEAFQVAAVIEKLPPSWNEYKKKLRHKRKDID 179
           M +E+ ++ Q Q    I + I + GM +DEAF V+ +I K PPSW  +  +L  +   + 
Sbjct: 314 MVEERPILEQVQVFNKIADSIVSAGMFLDEAFHVSTIISKFPPSWRGFCTRLMEEEY-LP 372

Query: 180 MQYLILQIRVEEEHLKQEKNEVAASLVSKAQIVEEVKKKKLTNYKPSNQRKKGNSKFKRV 239
           +  L+ +++ EEE L+     V     + +  +E       T+      R   +  +KR 
Sbjct: 373 VWMLMERVKAEEELLRNGAKGVTYRPATGSSQMERTPSLGTTH------RGSQSVGWKRK 426

Query: 240 GSKPNQGNSKPCYVCGKSGHLAKDYRYRKANPNSNPPTKHSRPNLAHVVETE 291
             + ++     C  CG+ GHLAK     K++  ++  +     ++A  VE+E
Sbjct: 427 EPERDERVIIVCDNCGRKGHLAKHCWGSKSDERASGKSNRINSSVAAPVESE 478


>ATMG00300.1 | Gag-Pol-related retrotransposon family protein |
           ChrM:89617-90054 REVERSE LENGTH=145 | 201606
          Length = 145

 Score = 55.8 bits (133), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 40/72 (55%)

Query: 448 VWHGRLGHLSVSTLERLMKQGYIPTTKQEKEDKCEICVETKLKKKPFKTVERTTNEPLEL 507
           +WH RL H+S   +E L+K+G++ ++K      CE C+  K  +  F T + TT  PL+ 
Sbjct: 71  LWHSRLAHMSQRGMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDY 130

Query: 508 VHFDLGDLKATP 519
           VH DL    + P
Sbjct: 131 VHSDLWGAPSVP 142

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