BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0660.1
(187 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G41980.1 | nuclease | Chr5:16793765-16794889 FORWARD LENGTH=3... 122 2e-33
AT1G43722.1 | nuclease | Chr1:16496403-16497377 FORWARD LENGTH=3... 91 6e-22
AT5G28730.1 | nuclease | Chr5:10779003-10780218 FORWARD LENGTH=2... 85 7e-20
AT5G28950.1 | nuclease | Chr5:10992505-10993435 FORWARD LENGTH=1... 78 2e-18
>AT5G41980.1 | nuclease | Chr5:16793765-16794889 FORWARD LENGTH=374
| 201606
Length = 374
Score = 122 bits (307), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 99/169 (58%), Gaps = 9/169 (5%)
Query: 2 RMDNNSFKALCNQFRAKGLLGNSKHIEVEEKMGIFLMTISHNCRNRFLQDRFQHSGETIS 61
RMD F LC+ + +GLL ++ I++E ++ IFL I HN R R +Q+ F +SGETIS
Sbjct: 47 RMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRTRAVQELFCYSGETIS 106
Query: 62 KYFHEVLNAMVRWSEEVLVLLSDLFSRTPIIRSHQRLREGAFKGAIGALDGTLISAHVPI 121
++F+ VLNA++ S+ D F + + + FK +G +D I V +
Sbjct: 107 RHFNNVLNAVIAISK-------DFFQPNSNSDTLEN-DDPYFKDCVGVVDSFHIPVMVGV 158
Query: 122 DQQTPYRGRGKGQCFQNVMAICDFDMRFIYVVAGWEGTAHDSKVLTEAI 170
D+Q P+R G G QNV+A FD+RF YV+AGWEG+A D +VL A+
Sbjct: 159 DEQGPFRN-GNGLLTQNVLAASSFDLRFNYVLAGWEGSASDQQVLNAAL 206
>AT1G43722.1 | nuclease | Chr1:16496403-16497377 FORWARD LENGTH=324
| 201606
Length = 324
Score = 91.3 bits (225), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 89/194 (45%), Gaps = 19/194 (9%)
Query: 1 MRMDNNSFKALCNQFRAKGLLGNSKHIEVEEKMGIFLMTISHNCRNRFLQDRFQHSGETI 60
+RM F LCN + L + +I +EE + +FL HN R + RF + ET+
Sbjct: 70 LRMSLPCFTTLCNMLQTNYDLQPTLNISIEESVAMFLRICGHNEVYRDVGLRFGRNQETV 129
Query: 61 SKYFHEVLNAMVRWSEEVLVLLSDLFSRTPIIRSHQRLRE---------GAFKGAIGALD 111
+ F EVL A LL+ + RTP + R+ E F G +GA+D
Sbjct: 130 QRKFREVLTAT--------ELLACDYIRTPTRQELYRIPERLQVDQRYWPYFSGFVGAMD 181
Query: 112 GTLISAHVPIDQQTPYRGRGKGQCFQNVMAICDFDMRFIYVVAGWEGTAHDSKVLTEAIH 171
GT + V D Q Y R N+MAICD M F Y+ G G+ +D+ VL A
Sbjct: 182 GTHVCVKVKPDLQGMYWNRHDNASL-NIMAICDLKMLFTYIWNGAPGSCYDTAVLQIA-Q 239
Query: 172 DPEFNFPMPPPSKF 185
+ FP+PP K+
Sbjct: 240 QSDSEFPLPPSEKY 253
>AT5G28730.1 | nuclease | Chr5:10779003-10780218 FORWARD LENGTH=296
| 201606
Length = 296
Score = 85.1 bits (209), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 89/186 (47%), Gaps = 27/186 (14%)
Query: 1 MRMDNNSFKALCNQFRAKGLLGNSKHIEVEEKMGIFLMTISHNCRNRFLQDRFQHSGETI 60
+RM + +F LC K L +S +I ++E + IFL+ + N R + RF H+ ETI
Sbjct: 28 IRMSSEAFTQLCEILHGKYGLQSSTNISLDESVAIFLIICASNDTQRDIALRFGHAQETI 87
Query: 61 SKYFHEVLNAMVRWSEEVLVLLSDLFSRTPIIRSHQRLREGAFKGAIGALDGTLISAHVP 120
+ FH+VL AM R + E + P R + LR IS +
Sbjct: 88 WRKFHDVLKAMERLAVEYI---------RP--RKVEELRA--------------ISNRLQ 122
Query: 121 IDQQT-PYRGRGKGQCFQNVMAICDFDMRFIYVVAGWEGTAHDSKVLTEAIHDPEFNFPM 179
D + P+ G NV+AICD DM F Y G G+ HD++VL+ AI D F +
Sbjct: 123 DDTRYWPFLMDLLGIASFNVLAICDLDMLFTYCFVGMAGSTHDARVLSAAISDDPL-FHV 181
Query: 180 PPPSKF 185
PP SK+
Sbjct: 182 PPDSKY 187
>AT5G28950.1 | nuclease | Chr5:10992505-10993435 FORWARD LENGTH=148
| 201606
Length = 148
Score = 78.2 bits (191), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 6/96 (6%)
Query: 90 PIIRSHQRLREGA-----FKGAIGALDGTLISAHVPIDQQTPYRGRGKGQCFQNVMAICD 144
P I +++RE FK +GA+D T I A V + +R R KG QN++A C+
Sbjct: 4 PEIAVPRKIRESTRLYPYFKDCVGAIDDTHIFAMVSQKKMPSFRNR-KGDISQNMLAACN 62
Query: 145 FDMRFIYVVAGWEGTAHDSKVLTEAIHDPEFNFPMP 180
FD+ F+YV++GWEG+AHDSKVL +A+ P+P
Sbjct: 63 FDVEFMYVLSGWEGSAHDSKVLNDALTRNSNRLPVP 98