BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0670.1
(134 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 145 2e-44
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 138 1e-38
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 138 1e-38
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 97 4e-27
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 145 bits (366), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 64/119 (53%), Positives = 88/119 (73%)
Query: 16 PDPSVYRRLIGRLLYLTVTRPDITFAVNNLSQFMQTPSRVHLDAAHRVLRYLKGTLDKGV 75
PDPS +R ++G L YLT+TRPDI++AVN + Q M P+ D RVLRY+KGT+ G+
Sbjct: 95 PDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGL 154
Query: 76 FLSADSSLHITGYCDSDWAGCPSTRRSTTGYFTMLGSSPLSWKSKKQPTVAKSSAEAEY 134
++ +S L++ +CDSDWAGC STRRSTTG+ T LG + +SW +K+QPTV++SS E EY
Sbjct: 155 YIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEY 213
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 138 bits (348), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 65/134 (48%), Positives = 87/134 (64%)
Query: 1 MEQKLRLSPTDGTPLPDPSVYRRLIGRLLYLTVTRPDITFAVNNLSQFMQTPSRVHLDAA 60
M+ + S G D YRRLIGRL+YL +TR DI+FAVN LSQF + P H A
Sbjct: 358 MDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAV 417
Query: 61 HRVLRYLKGTLDKGVFLSADSSLHITGYCDSDWAGCPSTRRSTTGYFTMLGSSPLSWKSK 120
++L Y+KGT+ +G+F S+ + + + + D+ + C TRRST GY LG+S +SWKSK
Sbjct: 418 MKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSK 477
Query: 121 KQPTVAKSSAEAEY 134
KQ V+KSSAEAEY
Sbjct: 478 KQQVVSKSSAEAEY 491
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 138 bits (348), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 65/134 (48%), Positives = 87/134 (64%)
Query: 1 MEQKLRLSPTDGTPLPDPSVYRRLIGRLLYLTVTRPDITFAVNNLSQFMQTPSRVHLDAA 60
M+ + S G D YRRLIGRL+YL +TR DI+FAVN LSQF + P H A
Sbjct: 358 MDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAV 417
Query: 61 HRVLRYLKGTLDKGVFLSADSSLHITGYCDSDWAGCPSTRRSTTGYFTMLGSSPLSWKSK 120
++L Y+KGT+ +G+F S+ + + + + D+ + C TRRST GY LG+S +SWKSK
Sbjct: 418 MKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSK 477
Query: 121 KQPTVAKSSAEAEY 134
KQ V+KSSAEAEY
Sbjct: 478 KQQVVSKSSAEAEY 491
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 97.4 bits (241), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 58/82 (70%)
Query: 29 LYLTVTRPDITFAVNNLSQFMQTPSRVHLDAAHRVLRYLKGTLDKGVFLSADSSLHITGY 88
+YLT+TRPD+TFAVN LSQF + A ++VL Y+KGT+ +G+F SA S L + +
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 89 CDSDWAGCPSTRRSTTGYFTML 110
DSDWA CP TRRS TG+ +++
Sbjct: 61 ADSDWASCPDTRRSVTGFCSLV 82