BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0690.1
(143 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G27870.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 54 3e-09
AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 50 8e-08
AT1G52990.2 | thioredoxin family protein | Chr1:19741201-1974344... 43 2e-05
AT2G33160.1 | glycoside hydrolase family 28 protein / polygalact... 43 3e-05
AT1G52990.1 | thioredoxin family protein | Chr1:19740503-1974344... 42 5e-05
>AT1G27870.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr1:9706657-9707298 REVERSE
LENGTH=213 | 201606
Length = 213
Score = 53.9 bits (128), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 57/122 (46%), Gaps = 5/122 (4%)
Query: 14 FDASFVN--VTSNTGISLIAHNAESKFIEAQVQTSRARNSEESEAMAILYDMVWAKEQNY 71
FD SFVN V S G + N S + Q + N+ ESE A++ M Y
Sbjct: 64 FDGSFVNGDVKSKAGWVVRDSNG-SYLLAGQAIGRKVDNALESEIQALIISMQHCWSHGY 122
Query: 72 KSIIIESDNMNLIKHIHNKRNTVHWQLLIHIRRIRETRREFEIVQFKYTRRELNSQADKL 131
K + E DN L I+ + V++ + IR I R+FE + F + RR N+ AD L
Sbjct: 123 KRVCFEGDNKMLFDLINGSK--VYFGVHNWIRDIHWWLRKFESIHFNWIRRHHNTPADIL 180
Query: 132 AK 133
AK
Sbjct: 181 AK 182
>AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr5:25967824-25968615 FORWARD
LENGTH=263 | 201606
Length = 263
Score = 50.1 bits (118), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 17/153 (11%)
Query: 2 ENGNHQQTPS--------------LKFDASFVNVTSNTGISLIAHNAESKFIEAQVQTSR 47
+NGN PS +DAS + +G+ I N++ IE + +
Sbjct: 91 QNGNRNADPSRNTKWSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQ 150
Query: 48 AR-NSEESEAMAILYDMVWAKEQNYKSIIIESDNMNLIKHIHNKRNTVHWQLLIHIRRIR 106
R +EE+E +++ + + +K +I E DN + + I+ K + Q + I+
Sbjct: 151 GRMTTEEAECSTLIWAIQASYGFGHKKVIFEGDNQTITRMINTKSSNPRLQHFLDT--IQ 208
Query: 107 ETRREFEIVQFKYTRRELNSQADKLAKWARKKN 139
FE ++F + RE N AD LAK A K+N
Sbjct: 209 SWIPSFESIEFSFKHREQNGCADFLAKQAIKEN 241
>AT1G52990.2 | thioredoxin family protein | Chr1:19741201-19743449
REVERSE LENGTH=243 | 201606
Length = 243
Score = 43.1 bits (100), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 3/127 (2%)
Query: 14 FDASFVNVTSNTGISLIAHNAESKFIEAQVQTSRAR-NSEESEAMAILYDMVWAKEQNYK 72
+DAS +G+ + N++ +E + + R EE+E A+++ + Y
Sbjct: 52 YDASHHEGDVVSGLGWLIRNSQGTVLECGMGKFQGRMTPEEAECSALIWAIQATSAFGYT 111
Query: 73 SIIIESDNMNLIKHIHNKRNTVHWQLLIHIRRIRETRREFEIVQFKYTRRELNSQADKLA 132
+I E DN N+ + I+ K + +L ++ I+ F +F +T RE N AD L
Sbjct: 112 KVIFEGDNSNVNRLINTKSDNP--RLKHYLDTIKSWIPSFTSTEFIFTHREQNQCADTLV 169
Query: 133 KWARKKN 139
K A K +
Sbjct: 170 KKAIKSS 176
>AT2G33160.1 | glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein |
Chr2:14053404-14056246 FORWARD LENGTH=664 | 201606
Length = 664
Score = 43.1 bits (100), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 15 DASFVN--VTSNTGISLIAHNAESKFIEAQVQTSRARNSEESEAMAILYDMVWAKEQNYK 72
D SF+N + G + HN +F Q + N+ E E A+L M + Y+
Sbjct: 516 DGSFINGNIPGKGGWIVRDHNGRYEF-AGQAIGNCIDNALECEFQALLMAMQHCWSKGYR 574
Query: 73 SIIIESDNMNLIKHIHNKRNTVHWQLLIHIRRIRETRREFEIVQFKYTRRELNSQADKLA 132
I E DN + I+ + +H+ IR I +FE QF++T R+ N AD LA
Sbjct: 575 RICFEGDNKEMFDLINGLK--MHFGAFNWIRDILWWASKFEQTQFQWTNRQNNKPADILA 632
Query: 133 K 133
+
Sbjct: 633 R 633
>AT1G52990.1 | thioredoxin family protein | Chr1:19740503-19743449
REVERSE LENGTH=313 | 201606
Length = 313
Score = 42.4 bits (98), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 3/127 (2%)
Query: 14 FDASFVNVTSNTGISLIAHNAESKFIEAQVQTSRAR-NSEESEAMAILYDMVWAKEQNYK 72
+DAS +G+ + N++ +E + + R EE+E A+++ + Y
Sbjct: 52 YDASHHEGDVVSGLGWLIRNSQGTVLECGMGKFQGRMTPEEAECSALIWAIQATSAFGYT 111
Query: 73 SIIIESDNMNLIKHIHNKRNTVHWQLLIHIRRIRETRREFEIVQFKYTRRELNSQADKLA 132
+I E DN N+ + I+ K + +L ++ I+ F +F +T RE N AD L
Sbjct: 112 KVIFEGDNSNVNRLINTKSDNP--RLKHYLDTIKSWIPSFTSTEFIFTHREQNQCADTLV 169
Query: 133 KWARKKN 139
K A K +
Sbjct: 170 KKAIKSS 176