BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0710.1
(535 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G68920.4 | basic helix-loop-helix (bHLH) DNA-binding superfam... 342 e-112
AT1G68920.2 | basic helix-loop-helix (bHLH) DNA-binding superfam... 342 e-112
AT1G68920.1 | basic helix-loop-helix (bHLH) DNA-binding superfam... 342 e-112
AT1G68920.3 | basic helix-loop-helix (bHLH) DNA-binding superfam... 340 e-111
AT1G26260.6 | cryptochrome-interacting basic-helix-loop-helix 5 ... 215 2e-64
>AT1G68920.4 | basic helix-loop-helix (bHLH) DNA-binding superfamily
protein | Chr1:25915620-25917675 FORWARD LENGTH=486 |
201606
Length = 486
Score = 342 bits (876), Expect = e-112, Method: Compositional matrix adjust.
Identities = 246/559 (44%), Positives = 319/559 (57%), Gaps = 99/559 (17%)
Query: 1 MDLGDKEEFGVEKRNEDHLNYHSSNIPS-DWQ---FGCENLGNQSLGFALNDNSMIVEKR 56
MDL K+EF EKRN D NY S N PS DW+ + ENL
Sbjct: 1 MDLSAKDEFSAEKRNPD--NYDSVNNPSGDWRVDSYPSENL------------------- 39
Query: 57 DLIMGSSACSSVSMVDSFSPNPFGQP-------------GLRNLSLYNGDVPK-LVPGWN 102
+ G ++CS M+DSF + P G + S + G + + L GWN
Sbjct: 40 -ISAGPASCSPSQMMDSFGQTLWYDPTSVQAVGYAGFNGGNASSSSFRGSIDRSLEMGWN 98
Query: 103 PITNIVPKRG--AFLPPGTEMLHRSLPQFAPDSGFIERAARFSCFNGGSFNDMPN-PINI 159
+ N++P +G FLP + L S+ QF DSGFIERAARFS F+GG+F+DM N P+
Sbjct: 99 -LPNLLPPKGNGLFLPNASSFLPPSMAQFPADSGFIERAARFSLFSGGNFSDMVNQPLGN 157
Query: 160 SESVNPYSKSRGTIQGSSDILFNGLNPLSVAQSQTNKPNMVEVDIDISASVDPGATNGSP 219
SE++ + + GT+QG Q Q+N+ N+ E D+S +V
Sbjct: 158 SEAIGLFLQGGGTMQG---------------QCQSNELNVGEPHNDVSVAVKE------- 195
Query: 220 MKSDVRLVSLARTPDESKP-VANSSNESEDAELSVSGGLDDPSGREPSSSKGLGPKKRKR 278
S R+ +++KP V S N SED + S G + GRE SS+ KKRKR
Sbjct: 196 --------STVRSSEQAKPNVPGSGNVSEDTQ---SSGGNGQKGRETSSNT----KKRKR 240
Query: 279 SGRAAMDSEPYQVNGANGETANDDNDLKQKDEQNPSSAGKGNKHGKDN-SQASDPPKEDY 337
+G+ ++ + + E +++ D K+ DEQ+P+S GK + GK Q+SDPPK+ Y
Sbjct: 241 NGQKNSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGY 300
Query: 338 IHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 397
IHVRARRGQATNSHSLAERVRREKISERMK+LQDLVPGC+KVTGKAVMLDEIINYVQSLQ
Sbjct: 301 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 360
Query: 398 RQVEFLSMKLASVNPRLDLNIEGLLAKDILQSRNGPSSSTMGFSPYMNVHPQLHPP-PTG 456
RQVEFLSMKLA+VNP++D N+EGLLAKD LQ R G SSST F P M++ +PP P G
Sbjct: 361 RQVEFLSMKLATVNPQMDFNLEGLLAKDALQLRAG-SSSTTPFPPNMSM---AYPPLPHG 416
Query: 457 LMQSGIPFMGSPADAFRRTMNSQLMAMNAGYKESNPQMANVWEDELNNVIQMGF-EGNVP 515
MQ + +G RT+ S L MN G+K Q N WE +L NVI + + G+V
Sbjct: 417 FMQQTLSSIG-------RTITSPLSPMNGGFKR---QETNGWEGDLQNVIHINYGAGDVT 466
Query: 516 ITDQELSGSLPPPGQMKVE 534
Q + + P MKVE
Sbjct: 467 PDPQAAATASLPAANMKVE 485
>AT1G68920.2 | basic helix-loop-helix (bHLH) DNA-binding superfamily
protein | Chr1:25915620-25917675 FORWARD LENGTH=486 |
201606
Length = 486
Score = 342 bits (876), Expect = e-112, Method: Compositional matrix adjust.
Identities = 246/559 (44%), Positives = 319/559 (57%), Gaps = 99/559 (17%)
Query: 1 MDLGDKEEFGVEKRNEDHLNYHSSNIPS-DWQ---FGCENLGNQSLGFALNDNSMIVEKR 56
MDL K+EF EKRN D NY S N PS DW+ + ENL
Sbjct: 1 MDLSAKDEFSAEKRNPD--NYDSVNNPSGDWRVDSYPSENL------------------- 39
Query: 57 DLIMGSSACSSVSMVDSFSPNPFGQP-------------GLRNLSLYNGDVPK-LVPGWN 102
+ G ++CS M+DSF + P G + S + G + + L GWN
Sbjct: 40 -ISAGPASCSPSQMMDSFGQTLWYDPTSVQAVGYAGFNGGNASSSSFRGSIDRSLEMGWN 98
Query: 103 PITNIVPKRG--AFLPPGTEMLHRSLPQFAPDSGFIERAARFSCFNGGSFNDMPN-PINI 159
+ N++P +G FLP + L S+ QF DSGFIERAARFS F+GG+F+DM N P+
Sbjct: 99 -LPNLLPPKGNGLFLPNASSFLPPSMAQFPADSGFIERAARFSLFSGGNFSDMVNQPLGN 157
Query: 160 SESVNPYSKSRGTIQGSSDILFNGLNPLSVAQSQTNKPNMVEVDIDISASVDPGATNGSP 219
SE++ + + GT+QG Q Q+N+ N+ E D+S +V
Sbjct: 158 SEAIGLFLQGGGTMQG---------------QCQSNELNVGEPHNDVSVAVKE------- 195
Query: 220 MKSDVRLVSLARTPDESKP-VANSSNESEDAELSVSGGLDDPSGREPSSSKGLGPKKRKR 278
S R+ +++KP V S N SED + S G + GRE SS+ KKRKR
Sbjct: 196 --------STVRSSEQAKPNVPGSGNVSEDTQ---SSGGNGQKGRETSSNT----KKRKR 240
Query: 279 SGRAAMDSEPYQVNGANGETANDDNDLKQKDEQNPSSAGKGNKHGKDN-SQASDPPKEDY 337
+G+ ++ + + E +++ D K+ DEQ+P+S GK + GK Q+SDPPK+ Y
Sbjct: 241 NGQKNSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGY 300
Query: 338 IHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 397
IHVRARRGQATNSHSLAERVRREKISERMK+LQDLVPGC+KVTGKAVMLDEIINYVQSLQ
Sbjct: 301 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 360
Query: 398 RQVEFLSMKLASVNPRLDLNIEGLLAKDILQSRNGPSSSTMGFSPYMNVHPQLHPP-PTG 456
RQVEFLSMKLA+VNP++D N+EGLLAKD LQ R G SSST F P M++ +PP P G
Sbjct: 361 RQVEFLSMKLATVNPQMDFNLEGLLAKDALQLRAG-SSSTTPFPPNMSM---AYPPLPHG 416
Query: 457 LMQSGIPFMGSPADAFRRTMNSQLMAMNAGYKESNPQMANVWEDELNNVIQMGF-EGNVP 515
MQ + +G RT+ S L MN G+K Q N WE +L NVI + + G+V
Sbjct: 417 FMQQTLSSIG-------RTITSPLSPMNGGFKR---QETNGWEGDLQNVIHINYGAGDVT 466
Query: 516 ITDQELSGSLPPPGQMKVE 534
Q + + P MKVE
Sbjct: 467 PDPQAAATASLPAANMKVE 485
>AT1G68920.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily
protein | Chr1:25915620-25917675 FORWARD LENGTH=486 |
201606
Length = 486
Score = 342 bits (876), Expect = e-112, Method: Compositional matrix adjust.
Identities = 246/559 (44%), Positives = 319/559 (57%), Gaps = 99/559 (17%)
Query: 1 MDLGDKEEFGVEKRNEDHLNYHSSNIPS-DWQ---FGCENLGNQSLGFALNDNSMIVEKR 56
MDL K+EF EKRN D NY S N PS DW+ + ENL
Sbjct: 1 MDLSAKDEFSAEKRNPD--NYDSVNNPSGDWRVDSYPSENL------------------- 39
Query: 57 DLIMGSSACSSVSMVDSFSPNPFGQP-------------GLRNLSLYNGDVPK-LVPGWN 102
+ G ++CS M+DSF + P G + S + G + + L GWN
Sbjct: 40 -ISAGPASCSPSQMMDSFGQTLWYDPTSVQAVGYAGFNGGNASSSSFRGSIDRSLEMGWN 98
Query: 103 PITNIVPKRG--AFLPPGTEMLHRSLPQFAPDSGFIERAARFSCFNGGSFNDMPN-PINI 159
+ N++P +G FLP + L S+ QF DSGFIERAARFS F+GG+F+DM N P+
Sbjct: 99 -LPNLLPPKGNGLFLPNASSFLPPSMAQFPADSGFIERAARFSLFSGGNFSDMVNQPLGN 157
Query: 160 SESVNPYSKSRGTIQGSSDILFNGLNPLSVAQSQTNKPNMVEVDIDISASVDPGATNGSP 219
SE++ + + GT+QG Q Q+N+ N+ E D+S +V
Sbjct: 158 SEAIGLFLQGGGTMQG---------------QCQSNELNVGEPHNDVSVAVKE------- 195
Query: 220 MKSDVRLVSLARTPDESKP-VANSSNESEDAELSVSGGLDDPSGREPSSSKGLGPKKRKR 278
S R+ +++KP V S N SED + S G + GRE SS+ KKRKR
Sbjct: 196 --------STVRSSEQAKPNVPGSGNVSEDTQ---SSGGNGQKGRETSSNT----KKRKR 240
Query: 279 SGRAAMDSEPYQVNGANGETANDDNDLKQKDEQNPSSAGKGNKHGKDN-SQASDPPKEDY 337
+G+ ++ + + E +++ D K+ DEQ+P+S GK + GK Q+SDPPK+ Y
Sbjct: 241 NGQKNSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGY 300
Query: 338 IHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 397
IHVRARRGQATNSHSLAERVRREKISERMK+LQDLVPGC+KVTGKAVMLDEIINYVQSLQ
Sbjct: 301 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 360
Query: 398 RQVEFLSMKLASVNPRLDLNIEGLLAKDILQSRNGPSSSTMGFSPYMNVHPQLHPP-PTG 456
RQVEFLSMKLA+VNP++D N+EGLLAKD LQ R G SSST F P M++ +PP P G
Sbjct: 361 RQVEFLSMKLATVNPQMDFNLEGLLAKDALQLRAG-SSSTTPFPPNMSM---AYPPLPHG 416
Query: 457 LMQSGIPFMGSPADAFRRTMNSQLMAMNAGYKESNPQMANVWEDELNNVIQMGF-EGNVP 515
MQ + +G RT+ S L MN G+K Q N WE +L NVI + + G+V
Sbjct: 417 FMQQTLSSIG-------RTITSPLSPMNGGFKR---QETNGWEGDLQNVIHINYGAGDVT 466
Query: 516 ITDQELSGSLPPPGQMKVE 534
Q + + P MKVE
Sbjct: 467 PDPQAAATASLPAANMKVE 485
>AT1G68920.3 | basic helix-loop-helix (bHLH) DNA-binding superfamily
protein | Chr1:25915620-25917675 FORWARD LENGTH=485 |
201606
Length = 485
Score = 340 bits (873), Expect = e-111, Method: Compositional matrix adjust.
Identities = 246/559 (44%), Positives = 321/559 (57%), Gaps = 100/559 (17%)
Query: 1 MDLGDKEEFGVEKRNEDHLNYHSSNIPS-DWQ---FGCENLGNQSLGFALNDNSMIVEKR 56
MDL K+EF EKRN D NY S N PS DW+ + ENL
Sbjct: 1 MDLSAKDEFSAEKRNPD--NYDSVNNPSGDWRVDSYPSENL------------------- 39
Query: 57 DLIMGSSACSSVSMVDSFSPNPFGQP-------------GLRNLSLYNGDVPK-LVPGWN 102
+ G ++CS M+DSF + P G + S + G + + L GWN
Sbjct: 40 -ISAGPASCSPSQMMDSFGQTLWYDPTSVQAVGYAGFNGGNASSSSFRGSIDRSLEMGWN 98
Query: 103 PITNIVPKRG--AFLPPGTEMLHRSLPQFAPDSGFIERAARFSCFNGGSFNDMPN-PINI 159
+ N++P +G FLP + L S+ QF DSGFIERAARFS F+GG+F+DM N P+
Sbjct: 99 -LPNLLPPKGNGLFLPNASSFLPPSMAQFPADSGFIERAARFSLFSGGNFSDMVNQPLGN 157
Query: 160 SESVNPYSKSRGTIQGSSDILFNGLNPLSVAQSQTNKPNMVEVDIDISASVDPGATNGSP 219
SE++ + + GT+QG Q Q+N+ N+ E D+S +V
Sbjct: 158 SEAIGLFLQGGGTMQG---------------QCQSNELNVGEPHNDVSVAVKE------- 195
Query: 220 MKSDVRLVSLARTPDESKP-VANSSNESEDAELSVSGGLDDPSGREPSSSKGLGPKKRKR 278
S R+ +++KP V S N SED + S G + GRE SS+ KKRKR
Sbjct: 196 --------STVRSSEQAKPNVPGSGNVSEDTQ---SSGGNGQKGRETSSNT----KKRKR 240
Query: 279 SGRAAMDSEPYQVNGANGETANDDNDLKQKDEQNPSSAGKGNKHGKDN-SQASDPPKEDY 337
+G+ + ++ ++ + E +++ D K+ DEQ+P+S GK + GK Q+SDPPK+ Y
Sbjct: 241 NGQNSEAAQSHRSQQSE-EEPDNNGDEKRNDEQSPNSPGKKSNSGKQQGKQSSDPPKDGY 299
Query: 338 IHVRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQ 397
IHVRARRGQATNSHSLAERVRREKISERMK+LQDLVPGC+KVTGKAVMLDEIINYVQSLQ
Sbjct: 300 IHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQ 359
Query: 398 RQVEFLSMKLASVNPRLDLNIEGLLAKDILQSRNGPSSSTMGFSPYMNVHPQLHPP-PTG 456
RQVEFLSMKLA+VNP++D N+EGLLAKD LQ R G SSST F P M++ +PP P G
Sbjct: 360 RQVEFLSMKLATVNPQMDFNLEGLLAKDALQLRAG-SSSTTPFPPNMSM---AYPPLPHG 415
Query: 457 LMQSGIPFMGSPADAFRRTMNSQLMAMNAGYKESNPQMANVWEDELNNVIQMGF-EGNVP 515
MQ + +G RT+ S L MN G+K Q N WE +L NVI + + G+V
Sbjct: 416 FMQQTLSSIG-------RTITSPLSPMNGGFKR---QETNGWEGDLQNVIHINYGAGDVT 465
Query: 516 ITDQELSGSLPPPGQMKVE 534
Q + + P MKVE
Sbjct: 466 PDPQAAATASLPAANMKVE 484
>AT1G26260.6 | cryptochrome-interacting basic-helix-loop-helix 5 |
Chr1:9087214-9089035 FORWARD LENGTH=390 | 201606
Length = 390
Score = 215 bits (547), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 165/396 (41%), Positives = 204/396 (51%), Gaps = 98/396 (24%)
Query: 126 LPQFAPDSGFIERAARFSCFNGGSF--NDMPNPINISESVNPYSKSRGTIQGSSDILFNG 183
+ QF DSGFIERAA+FS F G N + + + +S + + GS L NG
Sbjct: 74 MAQFPADSGFIERAAKFSFFGCGEMMMNQQQSSLGVPDSTGLFLQDTQIPSGSK--LDNG 131
Query: 184 LNPLSVAQSQTNKPNMVEVDIDISASVDPGATNGSPMKSDVRLVSLARTPDESKPVANSS 243
PL+ D SK V S
Sbjct: 132 --PLT---------------------------------------------DASKLVKERS 144
Query: 244 --NESEDAELSVSGGLDDPSGREPSSSKGLGPKKRKRSGRAAMDSEPYQVNGANGETAND 301
N SED++ S G DD + +SSKG KKRKR G+ + E
Sbjct: 145 INNVSEDSQSSGGNGHDDAKCGQ-TSSKGFSSKKRKRIGKDCEEEE-------------- 189
Query: 302 DNDLKQKDEQNPSS-AGKGNKHGKDNSQASDPPKEDYIHVRARRGQATNSHSLAERVRRE 360
D KQKDEQ+P+S A K N Q SD K+ YIH+RARRGQATNSHSLAERVRRE
Sbjct: 190 --DKKQKDEQSPTSNANKTNSE----KQPSDSLKDGYIHMRARRGQATNSHSLAERVRRE 243
Query: 361 KISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLASVNPRLDLNIEG 420
KISERMK+LQDLVPGC KVTGKAVMLDEIINYVQSLQ Q+EFLSMKL++VNP LD N+E
Sbjct: 244 KISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLSMKLSAVNPVLDFNLES 303
Query: 421 LLAKDILQSRNGPSSSTMGFSPYMNVHPQLHPPPTGLMQSGIPFMGSPADAFRRTMNSQL 480
LLAKD LQ SS F M++ L+PP + L Q+G F + S +
Sbjct: 304 LLAKDALQ------SSAPTFPHNMSM---LYPPVSYLSQTG----------FMQPNISSM 344
Query: 481 MAMNAGYKESNPQMANVWEDELNNVIQMGFE-GNVP 515
++ G K Q + +E + +N++ M E G P
Sbjct: 345 SLLSGGLKR---QETHGYESDHHNLVHMNHETGTAP 377