BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000117.1_g0780.1
         (191 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485...    66   1e-12
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485...    66   1e-12

>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
           Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
          Length = 1043

 Score = 66.2 bits (160), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 27/145 (18%)

Query: 4   PGKTHWEVVKWVLRYLKGTVGTVFAF---VETHVRVHG---------------------- 38
           P   H + V  +L Y+KGTVG    +    E  ++V                        
Sbjct: 409 PRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLG 468

Query: 39  -TLVNWQSMLQSTVALSTTEVEYMAMTKGVKEPLWLWGLLDDLGIKKERVDV-WCDSQSA 96
            +L++W+S  Q  V+ S+ E EY A++    E +WL     +L +   +  + +CD+ +A
Sbjct: 469 TSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAA 528

Query: 97  IYLAKNRVHHARTKHIDVRYHFVRD 121
           I++A N V H RTKHI+   H VR+
Sbjct: 529 IHIATNAVFHERTKHIESDCHSVRE 553


>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
           Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
          Length = 1043

 Score = 66.2 bits (160), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 27/145 (18%)

Query: 4   PGKTHWEVVKWVLRYLKGTVGTVFAF---VETHVRVHG---------------------- 38
           P   H + V  +L Y+KGTVG    +    E  ++V                        
Sbjct: 409 PRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLG 468

Query: 39  -TLVNWQSMLQSTVALSTTEVEYMAMTKGVKEPLWLWGLLDDLGIKKERVDV-WCDSQSA 96
            +L++W+S  Q  V+ S+ E EY A++    E +WL     +L +   +  + +CD+ +A
Sbjct: 469 TSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAA 528

Query: 97  IYLAKNRVHHARTKHIDVRYHFVRD 121
           I++A N V H RTKHI+   H VR+
Sbjct: 529 IHIATNAVFHERTKHIESDCHSVRE 553

Top