BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0880.1
(310 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 90 1e-19
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 90 1e-19
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 82 1e-18
ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 55 3e-09
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 89.7 bits (221), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 58/90 (64%), Gaps = 8/90 (8%)
Query: 221 EPVTFKQAITAQERESWLVAMQEEIESLHKNKTWEVVPLPEGKSVIGCKWVYKKKEDSSE 280
EP T+ +A +E W AM +EI ++ TWE+ LP K IGCKWVYK K +S
Sbjct: 85 EPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD- 140
Query: 281 IKGT--RYKARLVAKGYTQKEGVDYNEIFS 308
GT RYKARLVAKGYTQ+EG+D+ E FS
Sbjct: 141 --GTIERYKARLVAKGYTQQEGIDFIETFS 168
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 89.7 bits (221), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 58/90 (64%), Gaps = 8/90 (8%)
Query: 221 EPVTFKQAITAQERESWLVAMQEEIESLHKNKTWEVVPLPEGKSVIGCKWVYKKKEDSSE 280
EP T+ +A +E W AM +EI ++ TWE+ LP K IGCKWVYK K +S
Sbjct: 85 EPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD- 140
Query: 281 IKGT--RYKARLVAKGYTQKEGVDYNEIFS 308
GT RYKARLVAKGYTQ+EG+D+ E FS
Sbjct: 141 --GTIERYKARLVAKGYTQQEGIDFIETFS 168
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 82.0 bits (201), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 63/99 (63%), Gaps = 5/99 (5%)
Query: 212 EYALSVEDDEPVTFKQAITAQERESWLVAMQEEIESLHKNKTWEVVPLPEGKSVIGCKWV 271
+Y+L++ K I A + W AMQEE+++L +NKTW +VP P ++++GCKWV
Sbjct: 15 KYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWV 74
Query: 272 YKKKEDSSEIKGT--RYKARLVAKGYTQKEGVDYNEIFS 308
+K K S GT R KARLVAKG+ Q+EG+ + E +S
Sbjct: 75 FKTKLHSD---GTLDRLKARLVAKGFHQEEGIYFVETYS 110
>ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | ChrM:207553-207915 REVERSE
LENGTH=120 | 201606
Length = 120
Score = 54.7 bits (130), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%)
Query: 1 MRSNSGLGVEWWAESVATACYIVNRSPHSSLDGGIPYEVWSGEHADYGRLKVFGCTAYYH 60
M GL + A++ TA +I+N+ P ++++ +P EVW Y L+ FGC AY H
Sbjct: 12 MLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYLRRFGCVAYIH 71
Query: 61 VKGNKLDNRAKKA 73
KL RAKK
Sbjct: 72 CDEGKLKPRAKKG 84