BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0950.1
(369 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G18410.1 | elongator complex protein | Chr2:7990768-7992588 F... 393 e-136
AT2G18410.2 | elongator complex protein | Chr2:7990768-7992203 F... 308 e-104
>AT2G18410.1 | elongator complex protein | Chr2:7990768-7992588
FORWARD LENGTH=374 | 201606
Length = 374
Score = 393 bits (1009), Expect = e-136, Method: Compositional matrix adjust.
Identities = 202/363 (55%), Positives = 266/363 (73%), Gaps = 12/363 (3%)
Query: 1 MAETICRSLRDGALSGEHAPALTIKDSIISPFGFDAFTYFLCSLSSNILAGKSPSQGVVL 60
MAE+I R LRDG GE APALTI++++ SPFG D Y L +LSS+ILAGKS SQG+VL
Sbjct: 1 MAESIFRKLRDGGEEGELAPALTIEETVASPFGLDVSGYLLTNLSSSILAGKSSSQGLVL 60
Query: 61 IAFHKSPSFYLDLLKSRGIDVSFSRKWIQILDCYSDPLGWKEGVGICSHSSS---SIYKN 117
I F +SPSFYL LLK +GI VS S KWI+ILDCY+DPLGW + S ++K
Sbjct: 61 ITFSRSPSFYLQLLKQKGIVVSSSSKWIRILDCYTDPLGWIDQSSTSFSEGSSLIKLHKC 120
Query: 118 VKDLDLLFSSVLQLGQEMVGQGKVRVSIAIDSVTEMLRHASLSCTASLINNFRSHDQVSS 177
V DL LFSS+++ G+E+VG GK R +AIDSV E+LRH+++ + L+ + RSH Q+SS
Sbjct: 121 VSDLKKLFSSIIEAGRELVGTGKTRFCVAIDSVNELLRHSAMPLVSGLLTDLRSHAQISS 180
Query: 178 VFWLIHSDLHEVKTTAVLEYMSSMVGSLEPMVLSANGQKSNPGNLFSLEQYFRKGKFHLR 237
VFW +++DLH+ K T LEY+S+M +LEP+ S++GQ++ NLFS+ Q F KG+FH+R
Sbjct: 181 VFWSLNTDLHQEKVTNALEYISTMKANLEPLCPSSDGQRNALENLFSVHQDFGKGRFHVR 240
Query: 238 LKRRNGRVKVMCEEFHVEESGIKFVPVSSVNEIV--NQSLLPKVQFNLQLSEKERADREN 295
K R GRV+VM EE+HV++SGI F P+SSV+ ++ +SLLPKVQFNLQLSEKER ++E
Sbjct: 241 FKLRKGRVRVMSEEYHVDQSGINFSPISSVDTVIAATKSLLPKVQFNLQLSEKERVEKEK 300
Query: 296 VVLPFEHQGNGRTLEIYDGRRSLSES---GSDMSTSTLQKEVVETDQSGK-GEIHYFRDS 351
VVLPFEHQ +G++ EIYDGRRSL + + +S+ LQ +VV SGK GEI YFRDS
Sbjct: 301 VVLPFEHQDDGKSNEIYDGRRSLVDGKIETTPLSSMELQTDVV---SSGKGGEIIYFRDS 357
Query: 352 DDD 354
DD+
Sbjct: 358 DDE 360
>AT2G18410.2 | elongator complex protein | Chr2:7990768-7992203
FORWARD LENGTH=306 | 201606
Length = 306
Score = 308 bits (790), Expect = e-104, Method: Compositional matrix adjust.
Identities = 154/286 (53%), Positives = 208/286 (72%), Gaps = 5/286 (1%)
Query: 1 MAETICRSLRDGALSGEHAPALTIKDSIISPFGFDAFTYFLCSLSSNILAGKSPSQGVVL 60
MAE+I R LRDG GE APALTI++++ SPFG D Y L +LSS+ILAGKS SQG+VL
Sbjct: 1 MAESIFRKLRDGGEEGELAPALTIEETVASPFGLDVSGYLLTNLSSSILAGKSSSQGLVL 60
Query: 61 IAFHKSPSFYLDLLKSRGIDVSFSRKWIQILDCYSDPLGWKEGVGICSHSSSSI---YKN 117
I F +SPSFYL LLK +GI VS S KWI+ILDCY+DPLGW + SS+ +K
Sbjct: 61 ITFSRSPSFYLQLLKQKGIVVSSSSKWIRILDCYTDPLGWIDQSSTSFSEGSSLIKLHKC 120
Query: 118 VKDLDLLFSSVLQLGQEMVGQGKVRVSIAIDSVTEMLRHASLSCTASLINNFRSHDQVSS 177
V DL LFSS+++ G+E+VG GK R +AIDSV E+LRH+++ + L+ + RSH Q+SS
Sbjct: 121 VSDLKKLFSSIIEAGRELVGTGKTRFCVAIDSVNELLRHSAMPLVSGLLTDLRSHAQISS 180
Query: 178 VFWLIHSDLHEVKTTAVLEYMSSMVGSLEPMVLSANGQKSNPGNLFSLEQYFRKGKFHLR 237
VFW +++DLH+ K T LEY+S+M +LEP+ S++GQ++ NLFS+ Q F KG+FH+R
Sbjct: 181 VFWSLNTDLHQEKVTNALEYISTMKANLEPLCPSSDGQRNALENLFSVHQDFGKGRFHVR 240
Query: 238 LKRRNGRVKVMCEEFHVEESGIKFVPVSSVNEIV--NQSLLPKVQF 281
K R GRV+VM EE+HV++SGI F P+SSV+ ++ +SLLPK +
Sbjct: 241 FKLRKGRVRVMSEEYHVDQSGINFSPISSVDTVIAATKSLLPKASY 286