BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g0990.1
(138 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G38790.1 | hypothetical protein | Chr5:15533785-15534180 FORW... 52 3e-09
>AT5G38790.1 | hypothetical protein | Chr5:15533785-15534180
FORWARD LENGTH=131 | 201606
Length = 131
Score = 52.4 bits (124), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 12/69 (17%)
Query: 9 EECSSSESGWTMYIASPM---DEDDNDDDPSDDGNSKDNYD---------DNDTDDSMAS 56
EECSSSESGWT Y++SP+ +++ D+D +G + NY + D+DDSMAS
Sbjct: 4 EECSSSESGWTTYLSSPIKVDEDEVVDEDYYYEGYNIYNYSSKVEHEEERNKDSDDSMAS 63
Query: 57 DASSGPNNQ 65
DASSGPN Q
Sbjct: 64 DASSGPNYQ 72