BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g1000.1
(126 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G57685.1 | glutamine dumper 3 | Chr5:23366356-23366802 REVERS... 49 5e-08
AT2G24762.1 | glutamine dumper 4 | Chr2:10559479-10559949 FORWAR... 47 3e-07
AT4G31730.1 | glutamine dumper 1 | Chr4:15361207-15361683 FORWAR... 45 1e-06
>AT5G57685.1 | glutamine dumper 3 | Chr5:23366356-23366802 REVERSE
LENGTH=148 | 201606
Length = 148
Score = 48.9 bits (115), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 8/96 (8%)
Query: 18 WNSPTAYLLVGMSTIMVITALSLTILLIAYCKQTA---ADNSSSPPQDISDHHIDIEK-A 73
W+SP YL G++ ++ + A +L IL +Y + + + + S +D+ + +K A
Sbjct: 28 WHSPVPYLFGGLAAMLGLIAFALLILACSYWRLSGYLDGEENQSRERDLEVGDVKPDKTA 87
Query: 74 VKPILPLPEWEPKIAVIMPGDDKPTFLLKPILPSST 109
VKP+ LPE K VIM G+ KPT+L P + + T
Sbjct: 88 VKPVA-LPE---KFLVIMAGNVKPTYLATPSVKTCT 119
>AT2G24762.1 | glutamine dumper 4 | Chr2:10559479-10559949 FORWARD
LENGTH=156 | 201606
Length = 156
Score = 47.0 bits (110), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 11/89 (12%)
Query: 18 WNSPTAYLLVGMSTIMVITALSLTILLIAYCK-QTAADNSSSPPQDISDHHIDIEKAVKP 76
W+SP YL G++ ++ + A +L IL +Y + T+ D+S +D EK +
Sbjct: 33 WHSPVPYLFGGLAAMLGLIAFALLILACSYWRLSTSGDDSG--------ERVDEEKESRS 84
Query: 77 ILPLPE--WEPKIAVIMPGDDKPTFLLKP 103
+ E K+ VIM GDD P FL P
Sbjct: 85 GVKAASAACEEKVLVIMAGDDLPRFLATP 113
>AT4G31730.1 | glutamine dumper 1 | Chr4:15361207-15361683 FORWARD
LENGTH=158 | 201606
Length = 158
Score = 45.1 bits (105), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 18 WNSPTAYLLVGMSTIMVITALSLTILLIAYCKQTAADNSSSPPQDISDHHIDIEKAVKPI 77
W+SP YL G++ ++ + A +L IL +Y + +++ D +KA
Sbjct: 30 WHSPVPYLFGGLAAMLGLIAFALLILACSYWRLSSSGEEDGQNVDEEKESRSGDKAANGA 89
Query: 78 LPLPEWEPKIAVIMPGDDKPTFLLKPILPSST 109
+E K VIM G+D P +L P + T
Sbjct: 90 -----YEEKFLVIMAGEDLPRYLATPAMKKCT 116