BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g1010.1
(304 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G19260.1 | TTF-type zinc finger protein with HAT dimerization... 101 2e-23
AT3G29765.1 | General transcription factor 2-related zinc finger... 99 8e-23
AT4G09660.1 | zinc finger MYM-type-like protein | Chr4:6104446-6... 95 2e-21
AT3G29763.1 | General transcription factor 2-related zinc finger... 94 4e-21
AT3G29450.1 | General transcription factor 2-related zinc finger... 84 8e-18
>AT1G19260.1 | TTF-type zinc finger protein with HAT dimerization
domain-containing protein | Chr1:6657260-6659569 REVERSE
LENGTH=769 | 201606
Length = 769
Score = 101 bits (251), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 84/136 (61%)
Query: 143 AKDADELKSSQADEIAKMLDVGELETGRGANQIGNLQRSGATRWSSHFGSVKSLIDMYGA 202
K D+++ ++ + + GE++TG G NQ +LQR G TRW SH+ ++ L +++ +
Sbjct: 400 CKRKDKIREIHRQKVEEKISNGEIKTGTGLNQELSLQRPGNTRWGSHYKTLLRLEELFSS 459
Query: 203 TCVVIRDIMQNTTNITLRGESQGLYIGMTSFEFVFILHLMWRIMDINDMLCQALQQKSQD 262
+V+ I T+ T R ++ G+ +F+FVF L LM +M + D L +ALQ+K QD
Sbjct: 460 IVIVLEYIQDEGTDTTKRQQAYGILKYFHTFDFVFYLELMLLVMGLTDSLSKALQRKDQD 519
Query: 263 IINAMNLVRTTKSLLK 278
I+NA++LV+TTK L+
Sbjct: 520 ILNAISLVKTTKCQLQ 535
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 71 DVDVISLERDPGLRLQIWEYPVNKRDEIRRAYLNVGPYQPILEEYPRTKCGKQFRKFQSS 130
D+++ L DP R I Y N+RDE+RR YL GP QP ++ + GK R+F
Sbjct: 14 DINLNELPSDPAKRKSILSYHPNQRDEVRREYLIRGPCQPRGHKFKQIAIGKVLRRFNPK 73
Query: 131 WFTSF-PWLEYSLAKD 145
WF + WLEYS+ K+
Sbjct: 74 WFDLYGDWLEYSVEKE 89
>AT3G29765.1 | General transcription factor 2-related zinc finger
protein | Chr3:11595467-11597077 REVERSE LENGTH=536 |
201606
Length = 536
Score = 98.6 bits (244), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 84/136 (61%)
Query: 143 AKDADELKSSQADEIAKMLDVGELETGRGANQIGNLQRSGATRWSSHFGSVKSLIDMYGA 202
K D+++ ++ + + GE++TG G NQ +LQR G TRW SH+ ++ L +++ +
Sbjct: 167 CKRKDKIREIDRQKVEEKISNGEIKTGTGLNQELSLQRPGNTRWGSHYKTLLRLEELFSS 226
Query: 203 TCVVIRDIMQNTTNITLRGESQGLYIGMTSFEFVFILHLMWRIMDINDMLCQALQQKSQD 262
+V+ I T+ T R ++ G+ +F+FVF L LM +M + D L +ALQ+K QD
Sbjct: 227 IVIVLEYIQDEGTDTTKRQQAYGILKYFHTFDFVFYLELMLLVMGLTDSLSKALQRKDQD 286
Query: 263 IINAMNLVRTTKSLLK 278
I+NA++LV+TTK L+
Sbjct: 287 ILNAISLVKTTKCQLQ 302
>AT4G09660.1 | zinc finger MYM-type-like protein |
Chr4:6104446-6106607 FORWARD LENGTH=664 | 201606
Length = 664
Score = 95.1 bits (235), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 81/132 (61%)
Query: 147 DELKSSQADEIAKMLDVGELETGRGANQIGNLQRSGATRWSSHFGSVKSLIDMYGATCVV 206
D+++ ++ + + GE++TG NQ +LQR G TRW SH+ ++ L +++ + +V
Sbjct: 348 DKIREIHRQKVEEKISNGEIKTGTRLNQELSLQRPGNTRWGSHYKTLLRLEELFSSIVIV 407
Query: 207 IRDIMQNTTNITLRGESQGLYIGMTSFEFVFILHLMWRIMDINDMLCQALQQKSQDIINA 266
+ I T+ T R ++ G+ +F+FVF L LM +M + D L +ALQ+K QDI+N
Sbjct: 408 LEYIQDEGTDTTKRQQAYGILKYFHTFDFVFYLELMLLVMGLTDSLSKALQRKDQDILNV 467
Query: 267 MNLVRTTKSLLK 278
++LV+TTK L+
Sbjct: 468 ISLVKTTKCQLQ 479
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 71 DVDVISLERDPGLRLQIWEYPVNKRDEIRRAYLNVGPYQPILEEYPRTKCGKQFRKFQSS 130
D++ L DP R I Y +N+RDE+RR YL GP QP ++ + GK R+F
Sbjct: 14 DINFNKLPSDPAKRKSILSYHLNQRDEVRREYLIRGPCQPRGHKFKQIVIGKVLRRFNPK 73
Query: 131 WFTSF-PWLEYSLAKD 145
WF + WLEYS+ K+
Sbjct: 74 WFDLYGDWLEYSVEKE 89
>AT3G29763.1 | General transcription factor 2-related zinc finger
protein | Chr3:11593924-11595441 REVERSE LENGTH=505 |
201606
Length = 505
Score = 94.0 bits (232), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 84/138 (60%)
Query: 141 SLAKDADELKSSQADEIAKMLDVGELETGRGANQIGNLQRSGATRWSSHFGSVKSLIDMY 200
+ K D+++ ++ + + GE++TG NQ +LQR G TRW SH+ ++ L +++
Sbjct: 266 AFCKRKDKIREIDRQKVEEKISNGEIKTGTRLNQELSLQRPGNTRWGSHYKTLLRLEELF 325
Query: 201 GATCVVIRDIMQNTTNITLRGESQGLYIGMTSFEFVFILHLMWRIMDINDMLCQALQQKS 260
+ +V+ I T+ T R ++ G+ +F+FVF L LM +M ++D L +A Q+K
Sbjct: 326 SSIVIVLEYIQDEGTDTTKRQQAYGILKYFHTFDFVFYLELMLLVMGLSDSLSKAWQRKD 385
Query: 261 QDIINAMNLVRTTKSLLK 278
QDI+NA++LV+TTK L+
Sbjct: 386 QDILNAISLVKTTKCQLQ 403
>AT3G29450.1 | General transcription factor 2-related zinc finger
protein | Chr3:11322669-11324582 FORWARD LENGTH=522 |
201606
Length = 522
Score = 84.0 bits (206), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 83/135 (61%)
Query: 143 AKDADELKSSQADEIAKMLDVGELETGRGANQIGNLQRSGATRWSSHFGSVKSLIDMYGA 202
K D ++ ++ + ++ GE++TG+G NQ +LQR G TRW +H+ ++ L+D++
Sbjct: 284 CKRKDRVRDEFRKKLEERINQGEIKTGKGLNQKLSLQRPGNTRWGTHYTTLLRLVDLFSV 343
Query: 203 TCVVIRDIMQNTTNITLRGESQGLYIGMTSFEFVFILHLMWRIMDINDMLCQALQQKSQD 262
V+ I + T+ T R ++ GL +F+FVF L LM I+ + + L ALQ+K QD
Sbjct: 344 IIKVLEWIEDDGTDSTKRRQANGLLKYFNTFDFVFYLQLMLLILGLTNSLSVALQRKDQD 403
Query: 263 IINAMNLVRTTKSLL 277
I+NAM+LV++TK L
Sbjct: 404 ILNAMSLVKSTKQQL 418