BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g1090.1
(269 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 75 4e-15
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 75 4e-15
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 52 4e-08
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 75.5 bits (184), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 48/66 (72%)
Query: 197 FKSDGSVKRYKARLVAKGCNQVEGLDYHDTFPPVAKLVTVRVLLSVASIKGWPLHQLDFI 256
+ SDG+++RYKARLVAKG Q EG+D+ +TF PV KL +V+++L++++I + LHQLD
Sbjct: 137 YNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDIS 196
Query: 257 TPFFKA 262
F
Sbjct: 197 NAFLNG 202
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 75.5 bits (184), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 48/66 (72%)
Query: 197 FKSDGSVKRYKARLVAKGCNQVEGLDYHDTFPPVAKLVTVRVLLSVASIKGWPLHQLDFI 256
+ SDG+++RYKARLVAKG Q EG+D+ +TF PV KL +V+++L++++I + LHQLD
Sbjct: 137 YNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDIS 196
Query: 257 TPFFKA 262
F
Sbjct: 197 NAFLNG 202
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 52.4 bits (124), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 193 FGHSFKSDGSVKRYKARLVAKGCNQVEGLDYHDTFPPVAKLVTVRVLLSVAS 244
F SDG++ R KARLVAKG +Q EG+ + +T+ PV + T+R +L+VA
Sbjct: 75 FKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQ 126