BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g1110.1
(319 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G40940.1 | putative fasciclin-like arabinogalactan protein 20... 169 5e-49
AT5G06920.1 | FASCICLIN-like arabinogalactan protein 21 precurso... 66 5e-12
AT1G15190.1 | Fasciclin-like arabinogalactan family protein | Ch... 50 6e-07
>AT5G40940.1 | putative fasciclin-like arabinogalactan protein 20 |
Chr5:16406656-16407930 REVERSE LENGTH=424 | 201606
Length = 424
Score = 169 bits (428), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 126/326 (38%), Positives = 172/326 (52%), Gaps = 56/326 (17%)
Query: 26 TLTSAIDILSDSGYLSMSLTLQLVSQTLIFPSPSA-TIFAPSDSAFIDSGQPSLDLLQYH 84
+++SA+++LSDSGYLSM LTL+L +Q L T+FAPSD +F GQPSL ++Y
Sbjct: 68 SVSSAVEVLSDSGYLSMGLTLKLANQDLNLEDWQELTLFAPSDQSFSKFGQPSLLDMKYQ 127
Query: 85 LSPLKYSLENLKSLPFGTKIPTLSFNQSLIIT-SSDCDDQISINNVKINESAILDFGSLS 143
LSP + E L++LP G KIPTL N SL +T SS + SINNV + +S + D G +
Sbjct: 128 LSPTRLPGETLRNLPNGAKIPTLRSNYSLTVTNSSRFGGKTSINNVVVQDSPVFDDGYVV 187
Query: 144 IFPIDEFF-------------------------------------NPNFQESN----PNP 162
I+ DEFF +PN + PN
Sbjct: 188 IYGSDEFFTSPTKISDDSSSSSSIPSTTSSTGSIPIPSSATQTPPSPNIASDSTRNLPN- 246
Query: 163 RGDLVCKNLIFNDTLDSEITKASSALISRGYSVMASFLDLQLK-GIRGN-TQMTILAPID 220
R V + IF AS L+SRG+ ++A+FL LQL+ GN T++T+ APID
Sbjct: 247 RSKPVNRFNIFE--------SASRLLMSRGFVIIATFLALQLEDNTSGNDTKITVFAPID 298
Query: 221 EVMEQFTKNFS-LSSVFHRHFLPCRLSLTDLYNL-DEGDRLETFSEGFNIEIRRAGDILT 278
E + T FS ++F H + L DL EG L+T +G+ IEI +GDIL
Sbjct: 299 EAIPNPTTKFSDYVTIFRGHVVSQLLLWKDLQKFAKEGSILQTVLKGYEIEISLSGDILL 358
Query: 279 LNGVQVNSPDIYYSDSIAVHGLQQII 304
LNGV + PD+Y +D IAVHG Q+I
Sbjct: 359 LNGVPLIYPDLYVNDWIAVHGFNQMI 384
>AT5G06920.1 | FASCICLIN-like arabinogalactan protein 21 precursor |
Chr5:2142858-2143919 FORWARD LENGTH=353 | 201606
Length = 353
Score = 66.2 bits (160), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 140/301 (46%), Gaps = 28/301 (9%)
Query: 29 SAIDILSDSGYLSMSLTLQLVSQTLIFPSPSATIFAPSDSAFIDSG--QPSL--DLLQYH 84
+A + L S + +++ L + + + SP+ T+FA D++F ++ P LL YH
Sbjct: 51 NASNTLRQSNFKAIATLLHISPEIFLSSSPNTTLFAIEDASFFNTSSLHPLFLKQLLHYH 110
Query: 85 LSPLKYSLENLKSLPFGTKIPTLSFNQSLIITSSDCDDQIS-INNVKINESAILDFGSLS 143
PL S+++L P GT +PTL ++S+ I++ + + + + +N+V+I + SL
Sbjct: 111 TLPLMLSMDDLLKKPQGTCLPTLLHHKSVQISTVNQESRTAEVNHVRITHPDMFLGDSLV 170
Query: 144 IFPIDEFFNPNFQESNPNPRGDLVCKNLIFNDTLDSE-------ITKASSALISRGYSVM 196
I + F+P Q + + +C++ N T ++E T+ L S G+
Sbjct: 171 IHGVIGPFSP-LQPHSDHLIHTPLCQSDTTNKTSNNEEVPVSIDWTRIVQLLSSNGFVPF 229
Query: 197 ASFLDLQLKGI-------RGNTQMTILAPIDEVMEQFTKNFSLSSVFHRHFLPCRLSLTD 249
A L L I + T +TILA + V F L V H L RL+ D
Sbjct: 230 AIGLHSVLNRIVNDHNHHKNLTGVTILATPNLVSLSSASPF-LYEVVRHHILVQRLTYKD 288
Query: 250 LYNLDEGDRLETFSEGFNIEIRR------AGDILTLNGVQVNSPDIYYSDSIAVHGLQQI 303
++ + ++T ++ I R GD + ++GV++ PD++ S + +HG+
Sbjct: 289 FASMSDKATVKTLDPYQDLTITRRNVNSSGGDFM-ISGVEIVDPDMFSSSNFVIHGISHT 347
Query: 304 I 304
+
Sbjct: 348 L 348
>AT1G15190.1 | Fasciclin-like arabinogalactan family protein |
Chr1:5227275-5228021 FORWARD LENGTH=248 | 201606
Length = 248
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 23/171 (13%)
Query: 5 FLTCLILLSLFPHSSPILPSETLTSAIDILSDSGYLSMSLTLQLVSQTLIF---PSPSAT 61
FL LI+L L PH S +P E L AI IL G + + ++ L+F S T
Sbjct: 14 FLGALIILCL-PHPSTGVPLEELERAIAILRVRGRALFANAI--ITSDLLFDLLSDESLT 70
Query: 62 IFAPSDSAFIDSGQPSLDL----------LQYHLSPLKYSLENLKSLPFGTKIPTLSFNQ 111
+FAP+DS D LD+ L+ H PL+ SL L+SLP + +PTL +
Sbjct: 71 LFAPTDSMLFD-----LDMTHSLPFYVSTLRLHSVPLRLSLSGLRSLPNSSSLPTLLPSH 125
Query: 112 SLIITS-SDCDDQISINNVKINESAILDFGSLSIFPIDEFFNPNFQESNPN 161
L++T S +D I ++ V++ + D +++ + + P S+PN
Sbjct: 126 RLLLTKHSSSNDSIFLDGVQLLIPGLFDGQHIAVHGLADLL-PLTAPSSPN 175
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 18/157 (11%)
Query: 180 EITKASSALISRGYSVMASFL---DLQLKGIRGNTQMTILAPIDEVMEQFTKNFSLS--- 233
E+ +A + L RG ++ A+ + DL L + + +T+ AP D ++ SL
Sbjct: 34 ELERAIAILRVRGRALFANAIITSDL-LFDLLSDESLTLFAPTDSMLFDLDMTHSLPFYV 92
Query: 234 SVFHRHFLPCRLSLTDLYNLDEGDRLETFSEGFNIEIRR---AGDILTLNGVQVNSPDIY 290
S H +P RLSL+ L +L L T + + + + D + L+GVQ+ P ++
Sbjct: 93 STLRLHSVPLRLSLSGLRSLPNSSSLPTLLPSHRLLLTKHSSSNDSIFLDGVQLLIPGLF 152
Query: 291 YSDSIAVHGLQQIITPT--------VEDSFALITSPQ 319
IAVHGL ++ T VEDS AL SP
Sbjct: 153 DGQHIAVHGLADLLPLTAPSSPNRLVEDSTALAKSPW 189