BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g1120.1
(330 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G40940.1 | putative fasciclin-like arabinogalactan protein 20... 167 2e-48
AT5G06920.1 | FASCICLIN-like arabinogalactan protein 21 precurso... 68 2e-12
AT1G15190.1 | Fasciclin-like arabinogalactan family protein | Ch... 47 1e-05
>AT5G40940.1 | putative fasciclin-like arabinogalactan protein 20 |
Chr5:16406656-16407930 REVERSE LENGTH=424 | 201606
Length = 424
Score = 167 bits (424), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/344 (34%), Positives = 180/344 (52%), Gaps = 45/344 (13%)
Query: 27 VTAAIDILSDSGFVSMSLTLQLVSKTLSFPSPAA-TIFAPSDAAFLKSGQPSLDLLQYHF 85
V++A+++LSDSG++SM LTL+L ++ L+ T+FAPSD +F K GQPSL ++Y
Sbjct: 69 VSSAVEVLSDSGYLSMGLTLKLANQDLNLEDWQELTLFAPSDQSFSKFGQPSLLDMKYQL 128
Query: 86 SPLKYSLENLISLPSGSKIPTLSRNQSLIVTTSDS-NGQISLNNVKINESAIIDIGSLSI 144
SP + E L +LP+G+KIPTL N SL VT S G+ S+NNV + +S + D G + I
Sbjct: 129 SPTRLPGETLRNLPNGAKIPTLRSNYSLTVTNSSRFGGKTSINNVVVQDSPVFDDGYVVI 188
Query: 145 FAIDEFF-------------------------------------DPSFQVVHGCKFPFSE 167
+ DEFF P+ P +
Sbjct: 189 YGSDEFFTSPTKISDDSSSSSSIPSTTSSTGSIPIPSSATQTPPSPNIASDSTRNLP-NR 247
Query: 168 DKLDSDFDSIAKASTTMISQGYSIMASFLDLQLPGLR--ETMNLTVFAPIDEAIEPYSRN 225
K + F+ AS ++S+G+ I+A+FL LQL +TVFAPIDEAI +
Sbjct: 248 SKPVNRFNIFESASRLLMSRGFVIIATFLALQLEDNTSGNDTKITVFAPIDEAIPNPTTK 307
Query: 226 LSKFSAVFHRHVLPCKLTYTDLINIDEEVT-LKTFSQGFTVKITKSGDVLSVNGVPVNLT 284
S + +F HV+ L + DL +E + L+T +G+ ++I+ SGD+L +NGVP L
Sbjct: 308 FSDYVTIFRGHVVSQLLLWKDLQKFAKEGSILQTVLKGYEIEISLSGDILLLNGVP--LI 365
Query: 285 SLEMFSSDSLVVHGLQQVISLPTEQNQIGQSFSFDDNSEDTDYG 328
+++ +D + VHG Q+I +Q +G S + +N E + G
Sbjct: 366 YPDLYVNDWIAVHGFNQMIVTKEKQVDVGDSITVLNNGEQEEEG 409
>AT5G06920.1 | FASCICLIN-like arabinogalactan protein 21 precursor |
Chr5:2142858-2143919 FORWARD LENGTH=353 | 201606
Length = 353
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 134/315 (42%), Gaps = 53/315 (16%)
Query: 30 AIDILSDSGFVSMSLTLQLVSKTLSFPSPAATIFAPSDAAFLKSG--QPSL--DLLQYHF 85
A + L S F +++ L + + SP T+FA DA+F + P LL YH
Sbjct: 52 ASNTLRQSNFKAIATLLHISPEIFLSSSPNTTLFAIEDASFFNTSSLHPLFLKQLLHYHT 111
Query: 86 SPLKYSLENLISLPSGSKIPTLSRNQSLIVTTSDSNGQISLNNVKINESAIIDIGSLSIF 145
PL S+++L+ P G+ +PTL ++S+ ++T + ES ++ + I
Sbjct: 112 LPLMLSMDDLLKKPQGTCLPTLLHHKSVQISTVN------------QESRTAEVNHVRIT 159
Query: 146 AIDEFFDPSFQVVHGCKFPFSEDKLDSDF---------DSIAKASTTM---ISQGYSIMA 193
D F S V+HG PFS + SD D+ K S +S ++ +
Sbjct: 160 HPDMFLGDSL-VIHGVIGPFSPLQPHSDHLIHTPLCQSDTTNKTSNNEEVPVSIDWTRIV 218
Query: 194 SFLDLQ--LP---GLRETMNLTV--------FAPIDEAIEPYSRNLSKFS----AVFHRH 236
L +P GL +N V + P +LS S V H
Sbjct: 219 QLLSSNGFVPFAIGLHSVLNRIVNDHNHHKNLTGVTILATPNLVSLSSASPFLYEVVRHH 278
Query: 237 VLPCKLTYTDLINIDEEVTLKTFS--QGFTV---KITKSGDVLSVNGVPVNLTSLEMFSS 291
+L +LTY D ++ ++ T+KT Q T+ + SG ++G V + +MFSS
Sbjct: 279 ILVQRLTYKDFASMSDKATVKTLDPYQDLTITRRNVNSSGGDFMISG--VEIVDPDMFSS 336
Query: 292 DSLVVHGLQQVISLP 306
+ V+HG+ + +P
Sbjct: 337 SNFVIHGISHTLEIP 351
>AT1G15190.1 | Fasciclin-like arabinogalactan family protein |
Chr1:5227275-5228021 FORWARD LENGTH=248 | 201606
Length = 248
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 91/203 (44%), Gaps = 42/203 (20%)
Query: 5 FLTSLILLSLFPISSPVLPSELVTAAIDILSDSG---FVSMSLTLQLVSKTLSFPSPAAT 61
FL +LI+L L P S +P E + AI IL G F + +T L+ LS + T
Sbjct: 14 FLGALIILCL-PHPSTGVPLEELERAIAILRVRGRALFANAIITSDLLFDLLS--DESLT 70
Query: 62 IFAPSDAAFLKSGQPSLDL----------LQYHFSPLKYSLENLISLPSGSKIPTLSRNQ 111
+FAP+D+ LD+ L+ H PL+ SL L SLP+ S +PTL +
Sbjct: 71 LFAPTDSMLFD-----LDMTHSLPFYVSTLRLHSVPLRLSLSGLRSLPNSSSLPTLLPSH 125
Query: 112 SLIVTT-SDSNGQISLNNVKINESAIIDIGSLSIFAIDEFFDPSFQVVHGCK------FP 164
L++T S SN I L+ V++ I FD VHG P
Sbjct: 126 RLLLTKHSSSNDSIFLDGVQL--------------LIPGLFDGQHIAVHGLADLLPLTAP 171
Query: 165 FSEDKLDSDFDSIAKASTTMISQ 187
S ++L D ++AK+ + S+
Sbjct: 172 SSPNRLVEDSTALAKSPWFLGSR 194