BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g1130.1
(265 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G08160.1 | serine/threonine protein kinase 3 | Chr5:2625903-2... 273 8e-91
AT5G08160.2 | serine/threonine protein kinase 3 | Chr5:2625903-2... 210 9e-67
>AT5G08160.1 | serine/threonine protein kinase 3 |
Chr5:2625903-2627942 REVERSE LENGTH=347 | 201606
Length = 347
Score = 273 bits (697), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 127/180 (70%), Positives = 156/180 (86%), Gaps = 1/180 (0%)
Query: 1 MGCSISGLNNLYDSVNGGGDIWINENRFRIVRKLGEGGSDYVYLVKEILTESASAAAGTG 60
MGCS SGLN LYD+VNGGGD+WINENRFRIVR+LGEGG +V+LVKEI+ +++SAA+G G
Sbjct: 1 MGCSFSGLNALYDAVNGGGDVWINENRFRIVRQLGEGGFAFVFLVKEIVADASSAASG-G 59
Query: 61 GISKKIKDPSHVSDDGTYTVKKVLIETEEQLEAVREEIRVSSMFSHPNLLPLLDHAIIAV 120
G++KK+KDP+H+S DGTY +KKVLI+ +EQLE VREEIRVSS+F+HPNLLPLLDHAII+V
Sbjct: 60 GLAKKVKDPAHLSADGTYAMKKVLIQNKEQLELVREEIRVSSLFNHPNLLPLLDHAIISV 119
Query: 121 KTSHEGSSNHEAYLLFPAHLDGTLVDHERAMKAKNESFSTMDVLQIFRQLCAGLNNMHNV 180
K EG+ HEA+LLFP HLDGTL+D+ MKAK E+FST DVL IFRQLC GL +MH++
Sbjct: 120 KDGQEGAWKHEAFLLFPVHLDGTLLDNFTLMKAKKETFSTTDVLHIFRQLCDGLKHMHSL 179
Score = 144 bits (364), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 67/94 (71%), Positives = 76/94 (80%), Gaps = 1/94 (1%)
Query: 172 AGLNNMHNVWSLGCTLYAIMYGVSPFEYVLEEPEGNLQSAIENAQIKWP-TEPKPSYPES 230
A ++ ++WSLGCTLYAIMYGVSPFEY L E G+LQ AI NAQIKWP T PK SYPE+
Sbjct: 253 ADIDERTDIWSLGCTLYAIMYGVSPFEYALGESGGSLQLAIVNAQIKWPNTGPKASYPEA 312
Query: 231 LHQFIKWMLQPQATVRPHISDIVIHVDKLIKKFS 264
LHQF+ WMLQPQA VRP I DI+IHVDKLI KF+
Sbjct: 313 LHQFVTWMLQPQAAVRPRIDDIIIHVDKLIAKFT 346
>AT5G08160.2 | serine/threonine protein kinase 3 |
Chr5:2625903-2627942 REVERSE LENGTH=311 | 201606
Length = 311
Score = 210 bits (534), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 105/180 (58%), Positives = 123/180 (68%), Gaps = 37/180 (20%)
Query: 1 MGCSISGLNNLYDSVNGGGDIWINENRFRIVRKLGEGGSDYVYLVKEILTESASAAAGTG 60
MGCS SGLN LYD+VNGGGD+WINENRFRI
Sbjct: 1 MGCSFSGLNALYDAVNGGGDVWINENRFRI------------------------------ 30
Query: 61 GISKKIKDPSHVSDDGTYTVKKVLIETEEQLEAVREEIRVSSMFSHPNLLPLLDHAIIAV 120
DP+H+S DGTY +KKVLI+ +EQLE VREEIRVSS+F+HPNLLPLLDHAII+V
Sbjct: 31 -------DPAHLSADGTYAMKKVLIQNKEQLELVREEIRVSSLFNHPNLLPLLDHAIISV 83
Query: 121 KTSHEGSSNHEAYLLFPAHLDGTLVDHERAMKAKNESFSTMDVLQIFRQLCAGLNNMHNV 180
K EG+ HEA+LLFP HLDGTL+D+ MKAK E+FST DVL IFRQLC GL +MH++
Sbjct: 84 KDGQEGAWKHEAFLLFPVHLDGTLLDNFTLMKAKKETFSTTDVLHIFRQLCDGLKHMHSL 143
Score = 143 bits (361), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 67/94 (71%), Positives = 76/94 (80%), Gaps = 1/94 (1%)
Query: 172 AGLNNMHNVWSLGCTLYAIMYGVSPFEYVLEEPEGNLQSAIENAQIKWP-TEPKPSYPES 230
A ++ ++WSLGCTLYAIMYGVSPFEY L E G+LQ AI NAQIKWP T PK SYPE+
Sbjct: 217 ADIDERTDIWSLGCTLYAIMYGVSPFEYALGESGGSLQLAIVNAQIKWPNTGPKASYPEA 276
Query: 231 LHQFIKWMLQPQATVRPHISDIVIHVDKLIKKFS 264
LHQF+ WMLQPQA VRP I DI+IHVDKLI KF+
Sbjct: 277 LHQFVTWMLQPQAAVRPRIDDIIIHVDKLIAKFT 310