BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g1160.1
(488 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 308 2e-94
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 308 2e-94
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 103 7e-26
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 91 2e-20
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 308 bits (789), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 149/339 (43%), Positives = 218/339 (64%), Gaps = 6/339 (1%)
Query: 17 ISLYASLDNISPSFRAFSTSLSTVIVPKCYGEALEHPGWKKAIEEEIDELNLNHTWSFVS 76
IS + S + +SP + +F ++ P Y EA E W A+++EI + HTW +
Sbjct: 60 ISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICT 119
Query: 77 RPTDAKVVGCRWVFTLKHNPDGTVSRLKARLVAKWFTQTYDIDYDETFSPVAKLNSIRVL 136
P + K +GC+WV+ +K+N DGT+ R KARLVAK +TQ ID+ ETFSPV KL S++++
Sbjct: 120 LPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLI 179
Query: 137 ISLAENLKCPLHQLDVKNAFLHGDLMKTVYMAQPPGFESSS------DLVCHLKKSIYGL 190
++++ LHQLD+ NAFL+GDL + +YM PPG+ + + VC+LKKSIYGL
Sbjct: 180 LAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGL 239
Query: 191 KQSPQAWFDKFSTTVTSHGMIRSHADHSLFYKKTSRGIVILLMYVDDIVVTGSDEEGIQI 250
KQ+ + WF KFS T+ G ++SH+DH+ F K T+ + +L+YVDDI++ +++ +
Sbjct: 240 KQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDE 299
Query: 251 LKHHLVTHFYTKDLGKLKYFLGIEVARSKFDINLSQRKYVLDLLEEACYLDCKPINSHMD 310
LK L + F +DLG LKYFLG+E+ARS IN+ QRKY LDLL+E L CKP + MD
Sbjct: 300 LKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMD 359
Query: 311 PNSKLCPEVGEVLPNSEMYGRLVGKLIYLTITRPDISYA 349
P+ G +++ Y RL+G+L+YL ITR DIS+A
Sbjct: 360 PSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFA 398
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 58/90 (64%)
Query: 353 LLLGVILLLGRVKKQFVVARSSVEAAHCAMERTTCELVWLKSFLAELGYSSSSAAPFYCD 412
+ LG L+ + KKQ VV++SS EA + A+ T E++WL F EL S +CD
Sbjct: 465 MFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCD 524
Query: 413 NQAAIHIASNPVFHDRTKHIEVDCYFIRPK 442
N AAIHIA+N VFH+RTKHIE DC+ +R +
Sbjct: 525 NTAAIHIATNAVFHERTKHIESDCHSVRER 554
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 308 bits (789), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 149/339 (43%), Positives = 218/339 (64%), Gaps = 6/339 (1%)
Query: 17 ISLYASLDNISPSFRAFSTSLSTVIVPKCYGEALEHPGWKKAIEEEIDELNLNHTWSFVS 76
IS + S + +SP + +F ++ P Y EA E W A+++EI + HTW +
Sbjct: 60 ISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICT 119
Query: 77 RPTDAKVVGCRWVFTLKHNPDGTVSRLKARLVAKWFTQTYDIDYDETFSPVAKLNSIRVL 136
P + K +GC+WV+ +K+N DGT+ R KARLVAK +TQ ID+ ETFSPV KL S++++
Sbjct: 120 LPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLI 179
Query: 137 ISLAENLKCPLHQLDVKNAFLHGDLMKTVYMAQPPGFESSS------DLVCHLKKSIYGL 190
++++ LHQLD+ NAFL+GDL + +YM PPG+ + + VC+LKKSIYGL
Sbjct: 180 LAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGL 239
Query: 191 KQSPQAWFDKFSTTVTSHGMIRSHADHSLFYKKTSRGIVILLMYVDDIVVTGSDEEGIQI 250
KQ+ + WF KFS T+ G ++SH+DH+ F K T+ + +L+YVDDI++ +++ +
Sbjct: 240 KQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDE 299
Query: 251 LKHHLVTHFYTKDLGKLKYFLGIEVARSKFDINLSQRKYVLDLLEEACYLDCKPINSHMD 310
LK L + F +DLG LKYFLG+E+ARS IN+ QRKY LDLL+E L CKP + MD
Sbjct: 300 LKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMD 359
Query: 311 PNSKLCPEVGEVLPNSEMYGRLVGKLIYLTITRPDISYA 349
P+ G +++ Y RL+G+L+YL ITR DIS+A
Sbjct: 360 PSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFA 398
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 58/90 (64%)
Query: 353 LLLGVILLLGRVKKQFVVARSSVEAAHCAMERTTCELVWLKSFLAELGYSSSSAAPFYCD 412
+ LG L+ + KKQ VV++SS EA + A+ T E++WL F EL S +CD
Sbjct: 465 MFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCD 524
Query: 413 NQAAIHIASNPVFHDRTKHIEVDCYFIRPK 442
N AAIHIA+N VFH+RTKHIE DC+ +R +
Sbjct: 525 NTAAIHIATNAVFHERTKHIESDCHSVRER 554
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 103 bits (258), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 82/126 (65%), Gaps = 5/126 (3%)
Query: 21 ASLDNISPSFRAFSTSLSTVIV--PKCYGEALEHPGWKKAIEEEIDELNLNHTWSFVSRP 78
A ++ ++P + S +++T I PK AL+ PGW +A++EE+D L+ N TW V P
Sbjct: 7 AGINKLNPKY---SLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPP 63
Query: 79 TDAKVVGCRWVFTLKHNPDGTVSRLKARLVAKWFTQTYDIDYDETFSPVAKLNSIRVLIS 138
+ ++GC+WVF K + DGT+ RLKARLVAK F Q I + ET+SPV + +IR +++
Sbjct: 64 VNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILN 123
Query: 139 LAENLK 144
+A+ L+
Sbjct: 124 VAQQLE 129
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 90.9 bits (224), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 71/120 (59%), Gaps = 3/120 (2%)
Query: 231 LLMYVDDIVVTGSDEEGIQILKHHLVTHFYTKDLGKLKYFLGIEVARSKFDINLSQRKYV 290
LL+YVDDI++TGS + +L L + F KDLG + YFLGI++ + LSQ KY
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 291 LDLLEEACYLDCKPINSHMDPNSKLCPEVGEV-LPNSEMYGRLVGKLIYLTITRPDISYA 349
+L A LDCKP+++ + KL V P+ + +VG L YLT+TRPDISYA
Sbjct: 63 EQILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYA 120