BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g1240.1
(263 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G49360.4 | F-box family protein | Chr1:18267338-18268474 REVE... 66 4e-12
AT1G49360.3 | F-box family protein | Chr1:18267338-18268474 REVE... 66 4e-12
AT1G49360.2 | F-box family protein | Chr1:18267338-18268474 REVE... 66 4e-12
AT1G49360.5 | F-box family protein | Chr1:18267338-18269423 REVE... 66 4e-12
AT1G49360.1 | F-box family protein | Chr1:18267338-18269423 REVE... 66 5e-12
>AT1G49360.4 | F-box family protein | Chr1:18267338-18268474 REVERSE
LENGTH=378 | 201606
Length = 378
Score = 65.9 bits (159), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 9/199 (4%)
Query: 7 NIFFYNPFAKVVIQLPGLPEQESKLYMHFSFVSSPTSSDCVVFAITSFLDNEDFNAKILV 66
+++F+NPF + I LP ES ++ +F+F +PT C+VF I +N + I +
Sbjct: 108 DMYFFNPFTRERIDLPRNRIMES-VHTNFAFSCAPTKKSCLVFGI----NNISSSVAIKI 162
Query: 67 GFITRGKNEWWFGIYPKSAEFTPGLISPVFCNGALCYLDSNGSLGVFETDGGSLKKIVPG 126
G W +P + + + L Y S +LGVF+ + ++P
Sbjct: 163 STWRPGATTWLHEDFPNLFPSYFRRLGNILYSDGLFYTASETALGVFDPTARTWN-VLPV 221
Query: 127 DLGYFNPDYKRFLVEHERKLFLVDIRYYLEMSIGVFRFDFSTESWVKVESLGKHMMFVSK 186
P R++ E+E +FLVD M V+R + W K E+L +F+S
Sbjct: 222 QPIPMAPRSIRWMTEYEGHIFLVDASSLEPM---VYRLNRLESVWEKKETLDGSSIFLSD 278
Query: 187 VSCISAVAPNSSMENKIYL 205
SC+ SM N +Y
Sbjct: 279 GSCVMTYGLTGSMSNILYF 297
>AT1G49360.3 | F-box family protein | Chr1:18267338-18268474 REVERSE
LENGTH=378 | 201606
Length = 378
Score = 65.9 bits (159), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 9/199 (4%)
Query: 7 NIFFYNPFAKVVIQLPGLPEQESKLYMHFSFVSSPTSSDCVVFAITSFLDNEDFNAKILV 66
+++F+NPF + I LP ES ++ +F+F +PT C+VF I +N + I +
Sbjct: 108 DMYFFNPFTRERIDLPRNRIMES-VHTNFAFSCAPTKKSCLVFGI----NNISSSVAIKI 162
Query: 67 GFITRGKNEWWFGIYPKSAEFTPGLISPVFCNGALCYLDSNGSLGVFETDGGSLKKIVPG 126
G W +P + + + L Y S +LGVF+ + ++P
Sbjct: 163 STWRPGATTWLHEDFPNLFPSYFRRLGNILYSDGLFYTASETALGVFDPTARTWN-VLPV 221
Query: 127 DLGYFNPDYKRFLVEHERKLFLVDIRYYLEMSIGVFRFDFSTESWVKVESLGKHMMFVSK 186
P R++ E+E +FLVD M V+R + W K E+L +F+S
Sbjct: 222 QPIPMAPRSIRWMTEYEGHIFLVDASSLEPM---VYRLNRLESVWEKKETLDGSSIFLSD 278
Query: 187 VSCISAVAPNSSMENKIYL 205
SC+ SM N +Y
Sbjct: 279 GSCVMTYGLTGSMSNILYF 297
>AT1G49360.2 | F-box family protein | Chr1:18267338-18268474 REVERSE
LENGTH=378 | 201606
Length = 378
Score = 65.9 bits (159), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 9/199 (4%)
Query: 7 NIFFYNPFAKVVIQLPGLPEQESKLYMHFSFVSSPTSSDCVVFAITSFLDNEDFNAKILV 66
+++F+NPF + I LP ES ++ +F+F +PT C+VF I +N + I +
Sbjct: 108 DMYFFNPFTRERIDLPRNRIMES-VHTNFAFSCAPTKKSCLVFGI----NNISSSVAIKI 162
Query: 67 GFITRGKNEWWFGIYPKSAEFTPGLISPVFCNGALCYLDSNGSLGVFETDGGSLKKIVPG 126
G W +P + + + L Y S +LGVF+ + ++P
Sbjct: 163 STWRPGATTWLHEDFPNLFPSYFRRLGNILYSDGLFYTASETALGVFDPTARTWN-VLPV 221
Query: 127 DLGYFNPDYKRFLVEHERKLFLVDIRYYLEMSIGVFRFDFSTESWVKVESLGKHMMFVSK 186
P R++ E+E +FLVD M V+R + W K E+L +F+S
Sbjct: 222 QPIPMAPRSIRWMTEYEGHIFLVDASSLEPM---VYRLNRLESVWEKKETLDGSSIFLSD 278
Query: 187 VSCISAVAPNSSMENKIYL 205
SC+ SM N +Y
Sbjct: 279 GSCVMTYGLTGSMSNILYF 297
>AT1G49360.5 | F-box family protein | Chr1:18267338-18269423 REVERSE
LENGTH=458 | 201606
Length = 458
Score = 66.2 bits (160), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 87/198 (43%), Gaps = 9/198 (4%)
Query: 7 NIFFYNPFAKVVIQLPGLPEQESKLYMHFSFVSSPTSSDCVVFAITSFLDNEDFNAKILV 66
+++F+NPF + I LP ES ++ +F+F +PT C+VF I +N + I +
Sbjct: 188 DMYFFNPFTRERIDLPRNRIMES-VHTNFAFSCAPTKKSCLVFGI----NNISSSVAIKI 242
Query: 67 GFITRGKNEWWFGIYPKSAEFTPGLISPVFCNGALCYLDSNGSLGVFETDGGSLKKIVPG 126
G W +P + + + L Y S +LGVF+ + ++P
Sbjct: 243 STWRPGATTWLHEDFPNLFPSYFRRLGNILYSDGLFYTASETALGVFDPTARTWN-VLPV 301
Query: 127 DLGYFNPDYKRFLVEHERKLFLVDIRYYLEMSIGVFRFDFSTESWVKVESLGKHMMFVSK 186
P R++ E+E +FLVD M V+R + W K E+L +F+S
Sbjct: 302 QPIPMAPRSIRWMTEYEGHIFLVDASSLEPM---VYRLNRLESVWEKKETLDGSSIFLSD 358
Query: 187 VSCISAVAPNSSMENKIY 204
SC+ SM N +Y
Sbjct: 359 GSCVMTYGLTGSMSNILY 376
>AT1G49360.1 | F-box family protein | Chr1:18267338-18269423 REVERSE
LENGTH=481 | 201606
Length = 481
Score = 65.9 bits (159), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 87/198 (43%), Gaps = 9/198 (4%)
Query: 7 NIFFYNPFAKVVIQLPGLPEQESKLYMHFSFVSSPTSSDCVVFAITSFLDNEDFNAKILV 66
+++F+NPF + I LP ES ++ +F+F +PT C+VF I +N + I +
Sbjct: 211 DMYFFNPFTRERIDLPRNRIMES-VHTNFAFSCAPTKKSCLVFGI----NNISSSVAIKI 265
Query: 67 GFITRGKNEWWFGIYPKSAEFTPGLISPVFCNGALCYLDSNGSLGVFETDGGSLKKIVPG 126
G W +P + + + L Y S +LGVF+ + ++P
Sbjct: 266 STWRPGATTWLHEDFPNLFPSYFRRLGNILYSDGLFYTASETALGVFDPTARTWN-VLPV 324
Query: 127 DLGYFNPDYKRFLVEHERKLFLVDIRYYLEMSIGVFRFDFSTESWVKVESLGKHMMFVSK 186
P R++ E+E +FLVD M V+R + W K E+L +F+S
Sbjct: 325 QPIPMAPRSIRWMTEYEGHIFLVDASSLEPM---VYRLNRLESVWEKKETLDGSSIFLSD 381
Query: 187 VSCISAVAPNSSMENKIY 204
SC+ SM N +Y
Sbjct: 382 GSCVMTYGLTGSMSNILY 399