BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g1280.1
(181 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G38710.2 | Methylenetetrahydrofolate reductase family protein... 172 7e-52
AT5G38710.1 | Methylenetetrahydrofolate reductase family protein... 172 7e-52
AT3G30775.2 | Methylenetetrahydrofolate reductase family protein... 165 7e-49
AT3G30775.1 | Methylenetetrahydrofolate reductase family protein... 165 7e-49
>AT5G38710.2 | Methylenetetrahydrofolate reductase family protein |
Chr5:15501340-15503696 FORWARD LENGTH=466 | 201606
Length = 466
Score = 172 bits (437), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 77/128 (60%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
Query: 50 SLGYPSPIHGSIQDTHACYDECASIMLEKASKGTG-AVLLATHNVESGRVDAMKAQDLGL 108
SLGY SP+H +IQ+TH CY++C S ++EKAS G+G AV+LATHN +SG++ A KA +LG+
Sbjct: 339 SLGYKSPVHDTIQNTHDCYNDCMSFLMEKASNGSGIAVILATHNTDSGKLGARKASELGI 398
Query: 109 EKNDEKVRFAQLKGMADGLSFALKNVGFQVSKYLPYGPVDMVVPYLLRRAEENRGLLSVS 168
K + K+ FAQL GM+D LSF LK GF VSKY+PYGPVD +PYL+RRA ENRG++S
Sbjct: 399 NKENGKIEFAQLYGMSDALSFGLKRAGFNVSKYMPYGPVDTAIPYLIRRAYENRGMMSTG 458
Query: 169 TMDMQLMR 176
+D QLMR
Sbjct: 459 ALDRQLMR 466
>AT5G38710.1 | Methylenetetrahydrofolate reductase family protein |
Chr5:15501340-15503899 FORWARD LENGTH=476 | 201606
Length = 476
Score = 172 bits (437), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 77/128 (60%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
Query: 50 SLGYPSPIHGSIQDTHACYDECASIMLEKASKGTG-AVLLATHNVESGRVDAMKAQDLGL 108
SLGY SP+H +IQ+TH CY++C S ++EKAS G+G AV+LATHN +SG++ A KA +LG+
Sbjct: 339 SLGYKSPVHDTIQNTHDCYNDCMSFLMEKASNGSGIAVILATHNTDSGKLGARKASELGI 398
Query: 109 EKNDEKVRFAQLKGMADGLSFALKNVGFQVSKYLPYGPVDMVVPYLLRRAEENRGLLSVS 168
K + K+ FAQL GM+D LSF LK GF VSKY+PYGPVD +PYL+RRA ENRG++S
Sbjct: 399 NKENGKIEFAQLYGMSDALSFGLKRAGFNVSKYMPYGPVDTAIPYLIRRAYENRGMMSTG 458
Query: 169 TMDMQLMR 176
+D QLMR
Sbjct: 459 ALDRQLMR 466
>AT3G30775.2 | Methylenetetrahydrofolate reductase family protein |
Chr3:12448880-12451126 REVERSE LENGTH=499 | 201606
Length = 499
Score = 165 bits (418), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 74/128 (57%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
Query: 50 SLGYPSPIHGSIQDTHACYDECASIMLEKASKGTG-AVLLATHNVESGRVDAMKAQDLGL 108
SLG SP+H +IQDTH+CY++C + ++EKAS G+G V+LATHN +SGR+ + KA DLG+
Sbjct: 360 SLGCKSPVHDTIQDTHSCYNDCMTFLMEKASNGSGFGVVLATHNADSGRLASRKASDLGI 419
Query: 109 EKNDEKVRFAQLKGMADGLSFALKNVGFQVSKYLPYGPVDMVVPYLLRRAEENRGLLSVS 168
+K + K+ FAQL GM+D LSF LK GF VSKY+P+GPV +PYLLRRA ENRG+++
Sbjct: 420 DKQNGKIEFAQLYGMSDALSFGLKRAGFNVSKYMPFGPVATAIPYLLRRAYENRGMMATG 479
Query: 169 TMDMQLMR 176
D QLMR
Sbjct: 480 AHDRQLMR 487
>AT3G30775.1 | Methylenetetrahydrofolate reductase family protein |
Chr3:12448880-12451126 REVERSE LENGTH=499 | 201606
Length = 499
Score = 165 bits (418), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 74/128 (57%), Positives = 98/128 (76%), Gaps = 1/128 (0%)
Query: 50 SLGYPSPIHGSIQDTHACYDECASIMLEKASKGTG-AVLLATHNVESGRVDAMKAQDLGL 108
SLG SP+H +IQDTH+CY++C + ++EKAS G+G V+LATHN +SGR+ + KA DLG+
Sbjct: 360 SLGCKSPVHDTIQDTHSCYNDCMTFLMEKASNGSGFGVVLATHNADSGRLASRKASDLGI 419
Query: 109 EKNDEKVRFAQLKGMADGLSFALKNVGFQVSKYLPYGPVDMVVPYLLRRAEENRGLLSVS 168
+K + K+ FAQL GM+D LSF LK GF VSKY+P+GPV +PYLLRRA ENRG+++
Sbjct: 420 DKQNGKIEFAQLYGMSDALSFGLKRAGFNVSKYMPFGPVATAIPYLLRRAYENRGMMATG 479
Query: 169 TMDMQLMR 176
D QLMR
Sbjct: 480 AHDRQLMR 487