BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g1380.1
(247 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G23320.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 52 4e-08
AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 48 3e-06
>AT3G23320.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr3:8344629-8345204 FORWARD
LENGTH=191 | 201606
Length = 191
Score = 52.4 bits (124), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Query: 99 LLLKYKDQSLVRYEKTNTENNILTNWTPPEAPFLKINVDASFPSFSDPAGIRCIMHDEKA 158
L +K+K+ V+ +T + W P A ++K N D S + +G+R I+ + +
Sbjct: 7 LDVKHKNDDNVKGGQTKSSR--TDKWQKPGAEWVKCNYDVSNHAGRQDSGLRWIIRNSQG 64
Query: 159 EFIAALADTIRG-QTAEECECQAILQAMQWTAELKIRHIHIESDNQILIRFLHNNNT 214
+ +G QT +E EC A++ A+Q +L R + E DN + R + N T
Sbjct: 65 TCLDCGCGKFQGRQTIKEAECTALIWAIQCAWDLGYRRVEFEGDNITVNRLIRNKET 121
>AT5G65005.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr5:25967824-25968615 FORWARD
LENGTH=263 | 201606
Length = 263
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 122 TNWTPPEAPFLKINVDASFPSFSDPAGIRCIMHDEKAEFIAALADTIRGQ-TAEECECQA 180
T W+PP LK N DAS + +G+ I+ + + I +G+ T EE EC
Sbjct: 103 TKWSPPGRDKLKCNYDASHHERNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEAECST 162
Query: 181 ILQAMQWTAELKIRHIHIESDNQILIRFLH 210
++ A+Q + + + E DNQ + R ++
Sbjct: 163 LIWAIQASYGFGHKKVIFEGDNQTITRMIN 192