BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g1430.1
(279 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G40390.1 | DNAse I-like superfamily protein | Chr1:15432576-1... 59 2e-09
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 54 5e-08
>AT1G40390.1 | DNAse I-like superfamily protein |
Chr1:15432576-15434674 REVERSE LENGTH=426 | 201606
Length = 426
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 10/149 (6%)
Query: 71 QLSKLTPDPSIPWLVIGDLNTILYPEDKLGGRSEFPSHA-----RKIRTQINTMGLHDLG 125
+LS +P + PWLV+GD N I + S PS+ ++ + L DL
Sbjct: 110 RLSASSPLCNSPWLVVGDFNQIASVTEHY---SLMPSNISLQGLEDLQACMRDSDLVDLP 166
Query: 126 FNGDPYTWSNRQFSGNLIKERLDRALSNQKWAIEYPDSILHHLPGVGSDHVPIILTTIHQ 185
G YTWSN Q N I +LDRA+ N W +P + P SDH ++ +
Sbjct: 167 CRGVLYTWSNHQ-QDNPILRKLDRAIVNGCWLATFPTASAIFDPPSDSDHAACMVILNNS 225
Query: 186 RPIG-RKPFKFIRTWMSHPDCYNFISNNW 213
P+ +K FK+ +HPD + I W
Sbjct: 226 PPLSKKKSFKYFSFLSTHPDFISSILAAW 254
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 23/198 (11%)
Query: 78 DPSIPWLVIGDLNTILYPEDKLGGRSEFPSHARKIRTQINTMGLH------------DLG 125
DPS+ LV + ++ + H ++T I GL D+
Sbjct: 206 DPSVSVLVFKKTDQLMILVGDFDQIAATSDHYSVLQTSIPMRGLEEFQNCLRDSDLVDIP 265
Query: 126 FNGDPYTWSNRQFSGNLIKERLDRALSNQKWAIEYPDSI-LHHLPGVGSDHVPIILTTIH 184
G YTWSN Q N I +LDRA++N W +P +I + L GV SDH P I+ +
Sbjct: 266 SRGVHYTWSNHQ-DDNPIIRKLDRAIANGDWFSSFPSAIAVFELSGV-SDHSPCIIILEN 323
Query: 185 QRPIGRKPFKFIRTWMSHPDCYNFISNNWPHSHNPIQNKLNHLALNLAS-------WNKN 237
+K F++ +HP ++ W P+ + + L +L + N+
Sbjct: 324 LPKRSKKCFRYFSFLSTHPTFLVSLTVAW-EEQIPVGSHMFSLGEHLKAAKKCCKLLNRQ 382
Query: 238 VFGHIETKINHLTEALQS 255
FG+I+ K ++L+S
Sbjct: 383 GFGNIQHKTKEALDSLES 400