BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g1440.1
(155 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G08180.2 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family pro... 226 8e-77
AT5G08180.1 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family pro... 226 8e-77
AT4G12600.1 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family pro... 61 2e-12
AT5G20160.1 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family pro... 60 4e-12
AT4G22380.1 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family pro... 60 7e-12
>AT5G08180.2 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
protein | Chr5:2631843-2633374 REVERSE LENGTH=156 |
201606
Length = 156
Score = 226 bits (575), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 113/156 (72%), Positives = 131/156 (83%), Gaps = 1/156 (0%)
Query: 1 MGSDSEADRSAMKEKKKIA-ALAPIAKPLAGKKLCKRTLKLVKKATESKCLKRGVKEVVK 59
MGSD+EA++S KEKKK A LAPIAKPLAGKKL KRT KL++KA KCLKRGVKEVVK
Sbjct: 1 MGSDTEAEKSIQKEKKKYAITLAPIAKPLAGKKLQKRTFKLIQKAAGKKCLKRGVKEVVK 60
Query: 60 SIRRGNKGLCVIAGNISPIDVITHLPVLCEEAEIPYVYVTSKEELATAGSTKRPTCCVLV 119
SIRRG KGLCVIAGNISPIDVITHLP+LCEEA +PYVYV SKE+LA AG+TKRPTCCVLV
Sbjct: 61 SIRRGQKGLCVIAGNISPIDVITHLPILCEEAGVPYVYVPSKEDLAQAGATKRPTCCVLV 120
Query: 120 LTKPTKGELSKEKQEELKADYTQVAAEVTELAVSIF 155
+ KP KG+L+ E+ +LK DY QV+ ++ ELA S+
Sbjct: 121 MLKPAKGDLTAEELAKLKTDYEQVSDDIKELATSVI 156
>AT5G08180.1 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
protein | Chr5:2631843-2633374 REVERSE LENGTH=156 |
201606
Length = 156
Score = 226 bits (575), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 113/156 (72%), Positives = 131/156 (83%), Gaps = 1/156 (0%)
Query: 1 MGSDSEADRSAMKEKKKIA-ALAPIAKPLAGKKLCKRTLKLVKKATESKCLKRGVKEVVK 59
MGSD+EA++S KEKKK A LAPIAKPLAGKKL KRT KL++KA KCLKRGVKEVVK
Sbjct: 1 MGSDTEAEKSIQKEKKKYAITLAPIAKPLAGKKLQKRTFKLIQKAAGKKCLKRGVKEVVK 60
Query: 60 SIRRGNKGLCVIAGNISPIDVITHLPVLCEEAEIPYVYVTSKEELATAGSTKRPTCCVLV 119
SIRRG KGLCVIAGNISPIDVITHLP+LCEEA +PYVYV SKE+LA AG+TKRPTCCVLV
Sbjct: 61 SIRRGQKGLCVIAGNISPIDVITHLPILCEEAGVPYVYVPSKEDLAQAGATKRPTCCVLV 120
Query: 120 LTKPTKGELSKEKQEELKADYTQVAAEVTELAVSIF 155
+ KP KG+L+ E+ +LK DY QV+ ++ ELA S+
Sbjct: 121 MLKPAKGDLTAEELAKLKTDYEQVSDDIKELATSVI 156
>AT4G12600.1 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
protein | Chr4:7453296-7454208 FORWARD LENGTH=128 |
201606
Length = 128
Score = 61.2 bits (147), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%)
Query: 18 IAALAPIAKPLAGKKLCKRTLKLVKKATESKCLKRGVKEVVKSIRRGNKGLCVIAGNISP 77
+ + P A PLA +L L LV++AT K LK+G E K++ RG V+A + P
Sbjct: 3 VEGVNPKAYPLADSQLSITILDLVQQATNYKQLKKGANEATKTLNRGISEFIVMAADTEP 62
Query: 78 IDVITHLPVLCEEAEIPYVYVTSKEELATAGSTKRP 113
++++ HLP+L E+ +PYV+V SK+ L A RP
Sbjct: 63 LEILLHLPLLAEDKNVPYVFVPSKQALGRACDVTRP 98
>AT5G20160.1 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
protein | Chr5:6804075-6805102 REVERSE LENGTH=128 |
201606
Length = 128
Score = 60.5 bits (145), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 54/91 (59%)
Query: 23 PIAKPLAGKKLCKRTLKLVKKATESKCLKRGVKEVVKSIRRGNKGLCVIAGNISPIDVIT 82
P A PLA +L L LV++AT K LK+G E K++ RG V+A + P++++
Sbjct: 8 PKAYPLADSQLSITILDLVQQATNYKQLKKGANEATKTLNRGISEFVVMAADAEPLEILL 67
Query: 83 HLPVLCEEAEIPYVYVTSKEELATAGSTKRP 113
HLP+L E+ +PYV+V SK+ L A RP
Sbjct: 68 HLPLLAEDKNVPYVFVPSKQALGRACGVTRP 98
>AT4G22380.1 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
protein | Chr4:11812041-11812922 REVERSE LENGTH=128 |
201606
Length = 128
Score = 59.7 bits (143), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 54/91 (59%)
Query: 23 PIAKPLAGKKLCKRTLKLVKKATESKCLKRGVKEVVKSIRRGNKGLCVIAGNISPIDVIT 82
P A PLA +L + LV++AT K LK+G E K++ RG V+A + P++++
Sbjct: 8 PKAYPLADSQLSITIMDLVQQATNYKQLKKGANEATKTLNRGISEFVVMAADAEPLEILL 67
Query: 83 HLPVLCEEAEIPYVYVTSKEELATAGSTKRP 113
HLP+L E+ +PYV+V SK+ L A RP
Sbjct: 68 HLPLLAEDKNVPYVFVPSKQALGRACGVTRP 98