BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000117.1_g1500.1
         (76 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G38760.1 | Late embryogenesis abundant protein (LEA) family p...    56   4e-12
AT5G53820.1 | Late embryogenesis abundant protein (LEA) family p...    49   2e-09
AT1G52680.1 | late embryogenesis abundant protein-related / LEA ...    39   3e-05

>AT5G38760.1 | Late embryogenesis abundant protein (LEA) family
          protein | Chr5:15524249-15524743 FORWARD LENGTH=67 |
          201606
          Length = 67

 Score = 55.8 bits (133), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 9/74 (12%)

Query: 1  MDKLSYNVGHAMGQAEVKKDQLVDKASGATQSPSLMDKASGALQSAKETGQQAGEQVKEK 60
          M   S N+    GQA   K Q  +KAS      ++MDKAS A QSAKE+ ++ G+Q+KEK
Sbjct: 1  MSSNSQNISFQAGQA---KGQTQEKAS------TMMDKASNAAQSAKESLKETGQQIKEK 51

Query: 61 TLGAVDAIKNATGM 74
            GA +++KNATGM
Sbjct: 52 AQGATESVKNATGM 65


>AT5G53820.1 | Late embryogenesis abundant protein (LEA) family
          protein | Chr5:21853475-21853866 FORWARD LENGTH=67 |
          201606
          Length = 67

 Score = 48.9 bits (115), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 13/71 (18%)

Query: 4  LSYNVGHAMGQAEVKKDQLVDKASGATQSPSLMDKASGALQSAKETGQQAGEQVKEKTLG 63
          +S+N G A GQ +       +KAS      +L+DKAS A QSAKE+ Q+ G+Q+K+K  G
Sbjct: 8  MSFNAGQAKGQTQ-------EKAS------NLIDKASNAAQSAKESIQEGGQQLKQKAQG 54

Query: 64 AVDAIKNATGM 74
          A + IK  TG+
Sbjct: 55 ASETIKEKTGI 65


>AT1G52680.1 | late embryogenesis abundant protein-related / LEA
          protein-like protein | Chr1:19618419-19618961 REVERSE
          LENGTH=114 | 201606
          Length = 114

 Score = 39.3 bits (90), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 27/92 (29%)

Query: 3  KLSYNVGHAMGQAEVKKDQLVDKASGA----------TQS----------PSLMDKASGA 42
          +LS++ G   GQ ++KK++ ++  S A          +QS          PSL+ +AS  
Sbjct: 6  QLSHSAGEVTGQVQLKKEEYLNNVSHAMNQNADHHTHSQSQLHSEHDQNNPSLISQASSV 65

Query: 43 LQSAKETGQQAGEQVKEKTLGAVDAIKNATGM 74
          +Q       Q G QVK    GA DA+KN  GM
Sbjct: 66 IQ-------QTGGQVKNMAQGAADAVKNTLGM 90


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