BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000117.1_g1530.1
(192 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G28430.1 | CLEC16A-like protein | Chr3:10657441-10662404 REVE... 180 1e-52
>AT3G28430.1 | CLEC16A-like protein | Chr3:10657441-10662404 REVERSE
LENGTH=837 | 201606
Length = 837
Score = 180 bits (456), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 86/137 (62%), Positives = 105/137 (76%), Gaps = 7/137 (5%)
Query: 13 VDAVPCRIAFEKGKERHFCFLAISKGTSGWVLLAEDQPFKNQSGVVRVTAPLAGSNPRID 72
VDAVPCRIAFE+GKER F FLA+S G SGW++LA+ +G+VRVTAPLAG PRID
Sbjct: 697 VDAVPCRIAFERGKERDFSFLALSSGESGWIVLADPD-----NGIVRVTAPLAGCKPRID 751
Query: 73 EKHLKWLHLRIRPSTLPSMD--KSDPFYKSKTKALIDGRWTLAFRDEGSCKSALSMILEE 130
EKH +WLHLRIRPSTLP +D K + K K+K L+DGRW LAFRD+ SC SA SM+ E
Sbjct: 752 EKHPRWLHLRIRPSTLPLLDPTKRGVYEKLKSKGLVDGRWILAFRDDESCHSAYSMVAGE 811
Query: 131 MDLQSKDVEKRLQPLVN 147
+DLQ +VE+RL+PL +
Sbjct: 812 IDLQCSEVERRLRPLFD 828