BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g0010.1
(118 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 92 1e-23
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 82 3e-19
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 82 3e-19
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 69 3e-16
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 91.7 bits (226), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%)
Query: 14 DPTYFKSLIGNLRYLTCTRPDILYGVGMVSMYMETLDESHLNVAKRLLRYVKGTLNDGLF 73
DP+ F+S++G L+YLT TRPDI Y V +V M + ++ KR+LRYVKGT+ GL+
Sbjct: 96 DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLY 155
Query: 74 FSCEQDFKLIDYSDSDWGRHLDERKSTSGFVFFMGYTAFTWSSKK 118
+ + DSDW R+ST+GF F+G +WS+K+
Sbjct: 156 IHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKR 200
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 82.0 bits (201), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/106 (36%), Positives = 62/106 (58%)
Query: 13 VDPTYFKSLIGNLRYLTCTRPDILYGVGMVSMYMETLDESHLNVAKRLLRYVKGTLNDGL 72
VD ++ LIG L YL TR DI + V +S + E +H ++L Y+KGT+ GL
Sbjct: 373 VDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGL 432
Query: 73 FFSCEQDFKLIDYSDSDWGRHLDERKSTSGFVFFMGYTAFTWSSKK 118
F+S + + +L +SD+ + D R+ST+G+ F+G + +W SKK
Sbjct: 433 FYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKK 478
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 82.0 bits (201), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/106 (36%), Positives = 62/106 (58%)
Query: 13 VDPTYFKSLIGNLRYLTCTRPDILYGVGMVSMYMETLDESHLNVAKRLLRYVKGTLNDGL 72
VD ++ LIG L YL TR DI + V +S + E +H ++L Y+KGT+ GL
Sbjct: 373 VDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGL 432
Query: 73 FFSCEQDFKLIDYSDSDWGRHLDERKSTSGFVFFMGYTAFTWSSKK 118
F+S + + +L +SD+ + D R+ST+G+ F+G + +W SKK
Sbjct: 433 FYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKK 478
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 68.9 bits (167), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%)
Query: 27 YLTCTRPDILYGVGMVSMYMETLDESHLNVAKRLLRYVKGTLNDGLFFSCEQDFKLIDYS 86
YLT TRPD+ + V +S + + + ++L YVKGT+ GLF+S D +L ++
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61
Query: 87 DSDWGRHLDERKSTSGF 103
DSDW D R+S +GF
Sbjct: 62 DSDWASCPDTRRSVTGF 78