BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g0030.1
(108 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 78 1e-18
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 71 2e-15
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 71 2e-15
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 77.8 bits (190), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Query: 1 MHNPSEEHMKAVFRILRYLKKYPGKIF---LFRKGGDMEVMGYTDADWAGDITDMRSTSG 57
MH P+ + R+LRY+K G IF K + V + D+DWAG + RST+G
Sbjct: 128 MHEPTLADFDLLKRVLRYVK---GTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTG 184
Query: 58 YFTFVCGNMVTFRAKKQKVVARSSAESELRGMAQGVCELLW 98
+ TF+ N++++ AK+Q V+RSS E+E R +A EL W
Sbjct: 185 FCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 71.2 bits (173), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 60/96 (62%)
Query: 4 PSEEHMKAVFRILRYLKKYPGKIFLFRKGGDMEVMGYTDADWAGDITDMRSTSGYFTFVC 63
P H +AV +IL Y+K G+ + +M++ ++DA + RST+GY F+
Sbjct: 409 PRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLG 468
Query: 64 GNMVTFRAKKQKVVARSSAESELRGMAQGVCELLWI 99
+++++++KKQ+VV++SSAE+E R ++ E++W+
Sbjct: 469 TSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWL 504
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 71.2 bits (173), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 60/96 (62%)
Query: 4 PSEEHMKAVFRILRYLKKYPGKIFLFRKGGDMEVMGYTDADWAGDITDMRSTSGYFTFVC 63
P H +AV +IL Y+K G+ + +M++ ++DA + RST+GY F+
Sbjct: 409 PRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLG 468
Query: 64 GNMVTFRAKKQKVVARSSAESELRGMAQGVCELLWI 99
+++++++KKQ+VV++SSAE+E R ++ E++W+
Sbjct: 469 TSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWL 504