BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g0040.1
(166 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 139 2e-38
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 139 2e-38
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 75 9e-17
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 139 bits (350), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 99/152 (65%), Gaps = 5/152 (3%)
Query: 1 MELPPGVTNSE-----VGKVCKFKKALYGLKQSPRAWFGRITKSMKAFGYKQSNSNHTLF 55
M+LPPG + VC KK++YGLKQ+ R WF + + ++ FG+ QS+S+HT F
Sbjct: 210 MKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYF 269
Query: 56 IKQKLGKLTALIVYVDDMVVTRNDSVEMEALKNYLSREFEMKDLGQLKYFLGIEVAKSSQ 115
+K ++VYVDD+++ N+ ++ LK+ L F+++DLG LKYFLG+E+A+S+
Sbjct: 270 LKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAA 329
Query: 116 GIFMSQRKYILDLLVETGMLDYKPVDTPIEAN 147
GI + QRKY LDLL ETG+L KP P++ +
Sbjct: 330 GINICQRKYALDLLDETGLLGCKPSSVPMDPS 361
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 139 bits (350), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 99/152 (65%), Gaps = 5/152 (3%)
Query: 1 MELPPGVTNSE-----VGKVCKFKKALYGLKQSPRAWFGRITKSMKAFGYKQSNSNHTLF 55
M+LPPG + VC KK++YGLKQ+ R WF + + ++ FG+ QS+S+HT F
Sbjct: 210 MKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYF 269
Query: 56 IKQKLGKLTALIVYVDDMVVTRNDSVEMEALKNYLSREFEMKDLGQLKYFLGIEVAKSSQ 115
+K ++VYVDD+++ N+ ++ LK+ L F+++DLG LKYFLG+E+A+S+
Sbjct: 270 LKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAA 329
Query: 116 GIFMSQRKYILDLLVETGMLDYKPVDTPIEAN 147
GI + QRKY LDLL ETG+L KP P++ +
Sbjct: 330 GINICQRKYALDLLDETGLLGCKPSSVPMDPS 361
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 75.1 bits (183), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 51/79 (64%)
Query: 66 LIVYVDDMVVTRNDSVEMEALKNYLSREFEMKDLGQLKYFLGIEVAKSSQGIFMSQRKYI 125
L++YVDD+++T + + + L LS F MKDLG + YFLGI++ G+F+SQ KY
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 126 LDLLVETGMLDYKPVDTPI 144
+L GMLD KP+ TP+
Sbjct: 63 EQILNNAGMLDCKPMSTPL 81