BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g0140.1
(105 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G35870.1 | early-responsive to dehydration stress protein (ER... 113 2e-30
>AT4G35870.1 | early-responsive to dehydration stress protein (ERD4)
| Chr4:16990332-16992785 FORWARD LENGTH=817 | 201606
Length = 817
Score = 113 bits (283), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 55/81 (67%), Positives = 64/81 (79%)
Query: 1 MPGPAGLIAKFLAVWHATGREIGRHCGADAAQFLLIEGGSCTVLLSIALFAVFFVLPLNL 60
MPGP+ L +K LAVW AT REI RHCGADAAQFLLIEGGS +L SIA+ AV +LPLNL
Sbjct: 72 MPGPSALFSKLLAVWKATCREIARHCGADAAQFLLIEGGSFVLLFSIAVLAVSVMLPLNL 131
Query: 61 YARTADIADQFSKTTINYIQK 81
YA TA ++D+ SKT I +IQK
Sbjct: 132 YAGTALLSDELSKTMITHIQK 152