BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g0170.1
(114 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G17455.2 | ELF4-like 4 | Chr1:5997932-5998276 FORWARD LENGTH=... 160 4e-52
AT1G17455.1 | ELF4-like 4 | Chr1:5997932-5998276 FORWARD LENGTH=... 160 4e-52
AT1G72630.1 | ELF4-like 2 | Chr1:27344988-27345347 FORWARD LENGT... 153 3e-49
AT2G06255.1 | ELF4-like 3 | Chr2:2459336-2459665 FORWARD LENGTH=... 149 4e-48
AT2G29950.1 | ELF4-like 1 | Chr2:12767790-12768167 FORWARD LENGT... 73 1e-17
>AT1G17455.2 | ELF4-like 4 | Chr1:5997932-5998276 FORWARD LENGTH=114
| 201606
Length = 114
Score = 160 bits (404), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 79/114 (69%), Positives = 95/114 (83%)
Query: 1 MEEDSFSGLGNGTQIDNKVVQTFQKSFLHVENILDQNRLLINEINQNHESKIPDNLGRNV 60
ME D SG G+ +D K++Q+FQKSF+ V++ILDQNRLLINEINQNHESK PDNLGRNV
Sbjct: 1 MEGDVLSGFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNV 60
Query: 61 GLIRELNNNIRRVVDLYSDLSSSLCKSMEASSEGDSSGTVKSDGRASQKRNRPA 114
GLI+ELNNNIRRV LY DLS S +S++ASSEG+SSGT+KSDG+A+QKR R
Sbjct: 61 GLIKELNNNIRRVASLYGDLSHSFARSVDASSEGESSGTLKSDGKANQKRFRSG 114
>AT1G17455.1 | ELF4-like 4 | Chr1:5997932-5998276 FORWARD LENGTH=114
| 201606
Length = 114
Score = 160 bits (404), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 79/114 (69%), Positives = 95/114 (83%)
Query: 1 MEEDSFSGLGNGTQIDNKVVQTFQKSFLHVENILDQNRLLINEINQNHESKIPDNLGRNV 60
ME D SG G+ +D K++Q+FQKSF+ V++ILDQNRLLINEINQNHESK PDNLGRNV
Sbjct: 1 MEGDVLSGFGDRHNMDGKLLQSFQKSFVDVQDILDQNRLLINEINQNHESKQPDNLGRNV 60
Query: 61 GLIRELNNNIRRVVDLYSDLSSSLCKSMEASSEGDSSGTVKSDGRASQKRNRPA 114
GLI+ELNNNIRRV LY DLS S +S++ASSEG+SSGT+KSDG+A+QKR R
Sbjct: 61 GLIKELNNNIRRVASLYGDLSHSFARSVDASSEGESSGTLKSDGKANQKRFRSG 114
>AT1G72630.1 | ELF4-like 2 | Chr1:27344988-27345347 FORWARD
LENGTH=119 | 201606
Length = 119
Score = 153 bits (386), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 77/115 (66%), Positives = 93/115 (80%), Gaps = 1/115 (0%)
Query: 1 MEEDSFSGLGNGTQIDNKVVQTFQKSFLHVENILDQNRLLINEINQNHESKIPDNLGRNV 60
ME D +SG G Q+D K++Q FQKSF+ V++ILDQNRLLINEINQNHESK D+LGRNV
Sbjct: 5 MEGDVYSGFGERYQMDGKLLQNFQKSFVQVQDILDQNRLLINEINQNHESKQADHLGRNV 64
Query: 61 GLIRELNNNIRRVVDLYSDLSSSLCKSMEASSEGDSSGTVKSDGRA-SQKRNRPA 114
GLIRELNNNIR V LY DLS S +S++ASSEG+S+GT+KSDG+A +QKR R
Sbjct: 65 GLIRELNNNIRTVASLYGDLSHSFARSVDASSEGESTGTLKSDGKANNQKRFRSG 119
>AT2G06255.1 | ELF4-like 3 | Chr2:2459336-2459665 FORWARD LENGTH=109
| 201606
Length = 109
Score = 149 bits (377), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 79/115 (68%), Positives = 94/115 (81%), Gaps = 7/115 (6%)
Query: 1 MEEDSFS-GLGNGTQIDNKVVQTFQKSFLHVENILDQNRLLINEINQNHESKIPDNLGRN 59
ME D+ S +G+G Q+D K++QTF+KSF+ V+NILD NRLLINEINQNHESKIPDNLGRN
Sbjct: 1 MEGDTISRMMGSGVQMDGKILQTFEKSFVQVQNILDHNRLLINEINQNHESKIPDNLGRN 60
Query: 60 VGLIRELNNNIRRVVDLYSDLSSSLCKSMEASSEGDSSGTVKSDGRASQKRNRPA 114
VGLIRELNNN+RRV LY DLS++ KSMEASSEGDS S+GR + +R RPA
Sbjct: 61 VGLIRELNNNVRRVAHLYVDLSNNFSKSMEASSEGDS-----SEGRGN-RRIRPA 109
>AT2G29950.1 | ELF4-like 1 | Chr2:12767790-12768167 FORWARD
LENGTH=125 | 201606
Length = 125
Score = 72.8 bits (177), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 49/74 (66%)
Query: 16 DNKVVQTFQKSFLHVENILDQNRLLINEINQNHESKIPDNLGRNVGLIRELNNNIRRVVD 75
D +V T F + LDQNR LI +N+NH S+IPDN+ RNVGLI E+N NI +V++
Sbjct: 34 DVEVWDTLSNGFKRAQLYLDQNRDLIQRVNENHMSRIPDNVSRNVGLINEINGNISQVME 93
Query: 76 LYSDLSSSLCKSME 89
+YSDLS + K +
Sbjct: 94 IYSDLSLNFAKKFD 107