BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g0220.1
(145 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G47680.1 | DNA binding protein | Chr3:17577483-17578391 REVER... 66 3e-13
AT5G41220.1 | glutathione S-transferase THETA 3 | Chr5:16494560-... 60 3e-11
AT5G41220.2 | glutathione S-transferase THETA 3 | Chr5:16494560-... 60 4e-11
AT5G41220.3 | glutathione S-transferase THETA 3 | Chr5:16494560-... 59 1e-10
AT1G66235.1 | no-apical-meristem-associated carboxy-terminal dom... 50 7e-08
>AT3G47680.1 | DNA binding protein | Chr3:17577483-17578391 REVERSE
LENGTH=302 | 201606
Length = 302
Score = 65.9 bits (159), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 43 TPNSSIFAKRYNHVDDGVLVNAYLNIATDAIIDNDQRESTFWNKIAEHFNERTNQN---- 98
TP ++++ +D VLV+A+LN + DA+I N+Q+ FW++IA ++ N
Sbjct: 40 TPKVKRERRKWSAGEDLVLVSAWLNTSKDAVIGNEQKGYAFWSRIAAYYGASPKLNGVEK 99
Query: 99 RAPEGLKCRWSEINKQCAKVCGHLSLLRKNPKSGKNDDDRV 139
R +K RW++IN+ K G K SG+NDDD V
Sbjct: 100 RETGHIKQRWTKINEGVGKFVGSYEAATKQKSSGQNDDDVV 140
>AT5G41220.1 | glutathione S-transferase THETA 3 |
Chr5:16494560-16496969 REVERSE LENGTH=590 | 201606
Length = 590
Score = 60.1 bits (144), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 51 KRYNHVDDGVLVNAYLNIATDAIIDNDQRESTFWNKIAEHFNERTN----QNRAPEGLKC 106
++++ +D +L++A+LN + D I+DN+ + FW +I +FN + R P K
Sbjct: 271 RKWSRAEDAILISAWLNTSKDPIVDNEHKACAFWKRIGAYFNNSASLANLPKREPSHCKQ 330
Query: 107 RWSEINKQCAKVCGHLSLLRKNPKSGKNDDD 137
RWS++N + K G SG+++DD
Sbjct: 331 RWSKLNDKVCKFVGCYDQALNQRSSGQSEDD 361
>AT5G41220.2 | glutathione S-transferase THETA 3 |
Chr5:16494560-16496623 REVERSE LENGTH=540 | 201606
Length = 540
Score = 60.1 bits (144), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 51 KRYNHVDDGVLVNAYLNIATDAIIDNDQRESTFWNKIAEHFNERTN----QNRAPEGLKC 106
++++ +D +L++A+LN + D I+DN+ + FW +I +FN + R P K
Sbjct: 221 RKWSRAEDAILISAWLNTSKDPIVDNEHKACAFWKRIGAYFNNSASLANLPKREPSHCKQ 280
Query: 107 RWSEINKQCAKVCGHLSLLRKNPKSGKNDDD 137
RWS++N + K G SG+++DD
Sbjct: 281 RWSKLNDKVCKFVGCYDQALNQRSSGQSEDD 311
>AT5G41220.3 | glutathione S-transferase THETA 3 |
Chr5:16494560-16496525 REVERSE LENGTH=532 | 201606
Length = 532
Score = 58.5 bits (140), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 51 KRYNHVDDGVLVNAYLNIATDAIIDNDQRESTFWNKIAEHFNERTN----QNRAPEGLKC 106
++++ +D +L++A+LN + D I+DN+ + FW +I +FN + R P K
Sbjct: 213 RKWSRAEDAILISAWLNTSKDPIVDNEHKACAFWKRIGAYFNNSASLANLPKREPSHCKQ 272
Query: 107 RWSEINKQCAKVCGHLSLLRKNPKSGKNDDD 137
RWS++N + K G SG+++DD
Sbjct: 273 RWSKLNDKVCKFVGCYDQALNQRSSGQSEDD 303
>AT1G66235.1 | no-apical-meristem-associated carboxy-terminal domain
protein | Chr1:24683006-24683931 REVERSE LENGTH=284 |
201606
Length = 284
Score = 50.4 bits (119), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 53 YNHVDDGVLVNAYLNIATDAIIDNDQRESTFWNKIAEHFNERTN---QNRAPEGLKCRWS 109
Y++ +D L Y++I+ D II Q FW+++AE F R N R+ + L+CR
Sbjct: 7 YSNEEDKFLCQVYMDISQDPIIGVYQSSDHFWDRVAESFENRKNPTWSKRSKKSLQCRLQ 66
Query: 110 EINKQCAKVCGHLSLLRKNPKSGKNDDD 137
I K K+ + L SG + DD
Sbjct: 67 TIEKASKKLHACIKLCENRRSSGASSDD 94