BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g0270.1
(424 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G13980.1 | SKI/DACH domain protein | Chr3:4619189-4620262 REV... 184 2e-54
AT1G54200.1 | DNA mismatch repair Msh6-like protein | Chr1:20235... 159 1e-44
AT3G42800.1 | AF-like protein | Chr3:14905837-14906862 FORWARD L... 103 2e-24
AT5G12050.1 | rho GTPase-activating protein | Chr5:3890213-38913... 67 5e-12
>AT3G13980.1 | SKI/DACH domain protein | Chr3:4619189-4620262
REVERSE LENGTH=357 | 201606
Length = 357
Score = 184 bits (468), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 173/433 (39%), Positives = 229/433 (52%), Gaps = 89/433 (20%)
Query: 1 MQKEKYQHDRRKPSFSSTLLDEIYRSIDGEKEEKEELVFYKEPMKKKQTSSVRERNNTIK 60
+K K R PSFSSTLLD+IYRSID E +KKK+ ++RN ++
Sbjct: 5 WEKPKSSSHHRNPSFSSTLLDQIYRSIDDSSPPPP-----LESIKKKKHHH-QQRNASLH 58
Query: 61 SEKQQKEDQKMGNLTKSCLIEKWVEEKVVRRKYVADFNQKNLQKNQNFGSCGSMIFNSSS 120
ED+++ + RR ADF + ++ +F + + SS
Sbjct: 59 ------EDREISPIYH-------------RRSIAADFERS--RRKTDFLRHSNSSSSDSS 97
Query: 121 SSSDSCCGGGGGFSSSETESIYSSKSNPKPIRTSMISSSTPQRRSSLFEFHQEKQRICVP 180
S S G S S SS+ PKPIRTS + S+
Sbjct: 98 GFSSSESDSFHGRSKSSASPPSSSRQQPKPIRTSSVDHSSAV------------------ 139
Query: 181 EQKSQIGNGFIKTKSRALKIYGDLKKVKQPISPGGKLATFINSLFTGGI--PKKPKFPSK 238
QK + GF++TKS+ALKIY DLKKVKQPISPGG+LATF+NSLFT PKK K +
Sbjct: 140 -QKPKELGGFLRTKSKALKIYSDLKKVKQPISPGGRLATFLNSLFTNAATNPKKHKKTTT 198
Query: 239 SSINGDHKDSKSGYTSTCSSASSFSRSCLSKTPLSSSTRVKRSVRFYPVSVIVDEDFR-- 296
++ + +STCSSASSFSRSCLSKTP SSS + KRSVRF PV+VI+DED
Sbjct: 199 VAVVEE-----PHSSSTCSSASSFSRSCLSKTP-SSSGKSKRSVRFCPVNVILDEDSSFT 252
Query: 297 ---AIGHKCTYEDQEPGLMSSTKFTKKGEEISSPLSLSPLMKNRRSVEEARDLFKGYH-E 352
A ++ Y++ E K+ EE +RR ++ A+DL + YH +
Sbjct: 253 MPYAYNNERLYDNNE---------AKRVEE------------HRRVIQAAKDLLRTYHNK 291
Query: 353 TKIDYEMRDHNVNFEDEDEDEDDDAASYSSSDLFELDHLRTIGGIERYRQELPVYETTHF 412
K+ N + +ED++DDAAS +SSDLFEL++L I GIERYR+ELPVYETT
Sbjct: 292 NKVT------TTNINNVEEDDEDDAASCASSDLFELENLSAI-GIERYREELPVYETTRL 344
Query: 413 DT-NCAIANGLIL 424
D N IA GLI+
Sbjct: 345 DNMNRVIATGLIV 357
>AT1G54200.1 | DNA mismatch repair Msh6-like protein |
Chr1:20235855-20236955 FORWARD LENGTH=366 | 201606
Length = 366
Score = 159 bits (402), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 172/419 (41%), Positives = 229/419 (54%), Gaps = 79/419 (18%)
Query: 7 QHDRRKPSFSSTLLDEIYRSIDGEKEEKEELVFYKEPMKKKQTSSVRERNNTIKSEKQQK 66
+ D R PSFSSTLLD+IYRSID +SS+R K++ Q +
Sbjct: 20 RRDHRHPSFSSTLLDQIYRSIDDSST---------------NSSSMR------KTKHQNR 58
Query: 67 EDQKMGNLTKSCLIEKWVEEKVVRRKYVADFNQKNLQKNQNFGSCGSMIFNSSSSSSDSC 126
ED ++ RR DFN +++N + + F SSSSS
Sbjct: 59 EDTRVS---------------ANRRD---DFN-----RSKNLKTIEPVFFKHSSSSSSDS 95
Query: 127 CGGGGGFSSSETESIYSSK--SNPKPIRTSMISSSTPQRRSSLFEFHQEKQRICVPEQKS 184
G S SS S+PKPIRT++ FE + R P +
Sbjct: 96 SGFSSSESDYFYRRSKSSPAISHPKPIRTTV----------ERFERSPQNHR---PNSSN 142
Query: 185 QIGNG-FIKTKSRALKIYGDLKKVKQPISPGGKLATFINSLFTG-GIPKKPKFPSKSSIN 242
+ +G F+KTKS+ALKIY DLKKVKQPISPGG+LATF+NS+FTG G KK + + +
Sbjct: 143 KQEHGSFLKTKSKALKIYSDLKKVKQPISPGGRLATFLNSIFTGAGNTKKLNKINTTVTS 202
Query: 243 GDHKDSKSGYTSTCSSASSFSRSCLSKTPLSSSTRVKRSVRFYPVSVIVDEDFRAIGHKC 302
+ + T+TCSSASSFSRSCLSKTP SSS + KRSVRF PV+VI DED +K
Sbjct: 203 TTAAAAAASSTTTCSSASSFSRSCLSKTP-SSSEKSKRSVRFCPVNVIFDEDSSKYNNKN 261
Query: 303 --TYEDQEPGLMSSTKFTKKGEEISSPLSLSPLMKNRRSVEEARDLFKGYHETKIDYEMR 360
Y + E ++ E I L + +NRR +E A++L + Y K + E+
Sbjct: 262 NKVYGNNE----------REYESIRHTLENRVMEENRRVIEAAKELLRSYQ--KKNKEVI 309
Query: 361 DHNVNFEDEDEDEDDDAASYSSSDLFELDHLRTIGGIERYRQELPVYETTHFDTNCAIA 419
+ V+ ED++ED+DDDA S +SSDLFELD+L I GI+RYR+ELPVYETT +TN I+
Sbjct: 310 E--VSVEDDEEDDDDDALSCTSSDLFELDNLSAI-GIDRYREELPVYETTRLNTNRIIS 365
>AT3G42800.1 | AF-like protein | Chr3:14905837-14906862 FORWARD
LENGTH=341 | 201606
Length = 341
Score = 103 bits (257), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 126/240 (52%), Gaps = 47/240 (19%)
Query: 194 KSRALKIYGDLKKVKQPISPGGKLATFINSLFTGGIPKKPKFPSKSSINGDHKDSKSGYT 253
K +A+KI +LK+ KQP+SPG +L +F+NS+F KK K S G D KS +
Sbjct: 140 KPKAVKIIEELKRSKQPVSPGARLTSFLNSIFQSN-AKKVKLCS----VGKTTDVKSSSS 194
Query: 254 STCSSASSFSRSCLSKTPLSSST--RVKRSVRFYPVSVIVDEDFRAIGHKCTYEDQEPGL 311
+C FSR+ +KT +++ +++RS+RFYPV V +D D R K ++P
Sbjct: 195 KSC-----FSRT-RNKTDNNNNNCKKLERSIRFYPVRVTIDGDCRDYAQKHITRVRKP-- 246
Query: 312 MSSTKFTKKGEEISSPLSLSPLMKNRRSVEEARDLFKGYHETKIDYEMRDHNVNFED--- 368
P ++SV+E ++ H T+ R N+ +D
Sbjct: 247 -------------------IPEFTAKKSVKE--EIKTNDHHTEFTCITR--NIGLKDFVR 283
Query: 369 ----EDEDEDDDAASYSSSDLFELDHLRTIGGIERYRQELPVYETTHFDTNCAIANGLIL 424
E ++E++DA S+SSSDLFELD R G+ RY +ELPVYETT F TN AIA L+L
Sbjct: 284 SNKYEGKEEEEDAWSHSSSDLFELDSYRI--GMGRYLKELPVYETTDFKTNQAIARSLLL 341
>AT5G12050.1 | rho GTPase-activating protein | Chr5:3890213-3891301
FORWARD LENGTH=362 | 201606
Length = 362
Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 90/227 (39%), Positives = 123/227 (54%), Gaps = 29/227 (12%)
Query: 196 RALKIYGDLKKVKQPISPGGKLATFINSLFTGG---------IPKKPKFPSKSSINGDHK 246
R++K G+ KK K P SPGG++ F+NSLF+ P+K + + +
Sbjct: 147 RSVKSSGNQKKPKTPASPGGRIVNFLNSLFSNNSKQSNAVKSYPRKTSYDDSAYVRKTSN 206
Query: 247 DSKSGYTSTCSSASSFSRSCLSKTPLSSSTRVKRSVRFYPVSVIVDEDFRAIGHKCTYED 306
D S T+TCSSASSFSRSC++K SS R+KRSVRF PV+VIV E F + E+
Sbjct: 207 DYHSS-TTTCSSASSFSRSCMNKGYEKSSGRIKRSVRFSPVNVIVPESF------TSKEE 259
Query: 307 QEPGLMSSTKFTKKGEEISSPLSLSPLMKNRRSVEE-ARDLFKGYHETKIDYEMRDHNV- 364
++ K KK E RRSVEE AR+ + YH+ + ++ +
Sbjct: 260 DYFSNGNARKSVKKNVEDGG----------RRSVEEIAREFLRDYHKNHENSLVKTNGFE 309
Query: 365 -NFEDEDEDEDDDAASYSSSDLFELDHLRTIGGIERYRQELPVYETT 410
+D+++D+DDD AS SSSDLFELD + Y ELPVYETT
Sbjct: 310 DYEDDDEDDDDDDVASDSSSDLFELDLVGNHHHHNVYGDELPVYETT 356