BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g0330.1
(243 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 137 8e-37
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 137 8e-37
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 92 8e-23
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 137 bits (346), Expect = 8e-37, Method: Composition-based stats.
Identities = 73/155 (47%), Positives = 94/155 (60%), Gaps = 5/155 (3%)
Query: 93 AEESESWLVAMQEETESLHKNKTWEVVPLPEGKSVISCKWVYMKKEDSSEIKDTRYKERL 152
A+E W AM +E ++ TWE+ LP K I CKWVY K +S + RYK RL
Sbjct: 92 AKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIE-RYKARL 150
Query: 153 VAKGYAQKEGVDYNEIFSPVVKHTSIRVLLSIVAHSDLELKQLHVKTAFLHEDLEEEIYM 212
VAKGY Q+EG+D+ E FSPV K TS++++L+I A + L QL + AFL+ DL+EEIYM
Sbjct: 151 VAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYM 210
Query: 213 AQPEGYKVEGKE----NQVCRLKKLFYELKQSPRQ 243
P GY + N VC LKK Y LKQ+ RQ
Sbjct: 211 KLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQ 245
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 137 bits (346), Expect = 8e-37, Method: Composition-based stats.
Identities = 73/155 (47%), Positives = 94/155 (60%), Gaps = 5/155 (3%)
Query: 93 AEESESWLVAMQEETESLHKNKTWEVVPLPEGKSVISCKWVYMKKEDSSEIKDTRYKERL 152
A+E W AM +E ++ TWE+ LP K I CKWVY K +S + RYK RL
Sbjct: 92 AKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIE-RYKARL 150
Query: 153 VAKGYAQKEGVDYNEIFSPVVKHTSIRVLLSIVAHSDLELKQLHVKTAFLHEDLEEEIYM 212
VAKGY Q+EG+D+ E FSPV K TS++++L+I A + L QL + AFL+ DL+EEIYM
Sbjct: 151 VAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYM 210
Query: 213 AQPEGYKVEGKE----NQVCRLKKLFYELKQSPRQ 243
P GY + N VC LKK Y LKQ+ RQ
Sbjct: 211 KLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQ 245
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 91.7 bits (226), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
Query: 74 EYALSVEDDESVTFKQAITAEESESWLVAMQEETESLHKNKTWEVVPLPEGKSVISCKWV 133
+Y+L++ K I A + W AMQEE ++L +NKTW +VP P ++++ CKWV
Sbjct: 15 KYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWV 74
Query: 134 YMKKEDSSEIKDTRYKERLVAKGYAQKEGVDYNEIFSPVVKHTSIRVLLSI 184
+ K S D R K RLVAKG+ Q+EG+ + E +SPVV+ +IR +L++
Sbjct: 75 FKTKLHSDGTLD-RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNV 124