BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g0430.1
(292 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 185 1e-52
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 185 1e-52
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 157 7e-47
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 63 2e-12
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 185 bits (469), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/274 (37%), Positives = 158/274 (57%), Gaps = 3/274 (1%)
Query: 5 YEMTDLGLMKYFLGIQVRQSKGEIFISQGKYVEDLLKIFQMSNCKHVATPIGVNEKLQLN 64
+++ DLG +KYFLG+++ +S I I Q KY DLL + CK + P+ + +
Sbjct: 308 FKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH 367
Query: 65 DGAPKVDPKIYRSLVGSLIYLTNTRPHIVYPVSLISRFMSDPSKIHFAAAKRILRYIQGT 124
G VD K YR L+G L+YL TR I + V+ +S+F P H A +IL YI+GT
Sbjct: 368 SGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGT 427
Query: 125 KNHGIKYVTEDENKLVGFTDSDWAGSLDDRKSTSGYVFKLGSKVIAWASKKQKTIALSSG 184
G+ Y ++ E +L F+D+ + D R+ST+GY LG+ +I+W SKKQ+ ++ SS
Sbjct: 428 VGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSA 487
Query: 185 EAEYIAATDASCEVVWIKRILEDLFQKEQGPTTIYCNNMSAIAMTKSSVFHNRTKHIELH 244
EAEY A + A+ E++W+ + +L PT ++C+N +AI + ++VFH RTKHIE
Sbjct: 488 EAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESD 547
Query: 245 HHFIRNL-VQQEEIQLQFVNTNEQWADIFTKAIT 277
H +R V Q + F +EQ D FT+ ++
Sbjct: 548 CHSVRERSVYQATLSYSFQAYDEQ--DGFTEYLS 579
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 185 bits (469), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/274 (37%), Positives = 158/274 (57%), Gaps = 3/274 (1%)
Query: 5 YEMTDLGLMKYFLGIQVRQSKGEIFISQGKYVEDLLKIFQMSNCKHVATPIGVNEKLQLN 64
+++ DLG +KYFLG+++ +S I I Q KY DLL + CK + P+ + +
Sbjct: 308 FKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH 367
Query: 65 DGAPKVDPKIYRSLVGSLIYLTNTRPHIVYPVSLISRFMSDPSKIHFAAAKRILRYIQGT 124
G VD K YR L+G L+YL TR I + V+ +S+F P H A +IL YI+GT
Sbjct: 368 SGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGT 427
Query: 125 KNHGIKYVTEDENKLVGFTDSDWAGSLDDRKSTSGYVFKLGSKVIAWASKKQKTIALSSG 184
G+ Y ++ E +L F+D+ + D R+ST+GY LG+ +I+W SKKQ+ ++ SS
Sbjct: 428 VGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSA 487
Query: 185 EAEYIAATDASCEVVWIKRILEDLFQKEQGPTTIYCNNMSAIAMTKSSVFHNRTKHIELH 244
EAEY A + A+ E++W+ + +L PT ++C+N +AI + ++VFH RTKHIE
Sbjct: 488 EAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESD 547
Query: 245 HHFIRNL-VQQEEIQLQFVNTNEQWADIFTKAIT 277
H +R V Q + F +EQ D FT+ ++
Sbjct: 548 CHSVRERSVYQATLSYSFQAYDEQ--DGFTEYLS 579
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 157 bits (398), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 119/199 (59%), Gaps = 7/199 (3%)
Query: 5 YEMTDLGLMKYFLGIQVRQSKGEIFISQGKYVEDLLKIFQMSNCKHVATPIGVNEKLQLN 64
+ M DLG + YFLGIQ++ +F+SQ KY E +L M +CK ++TP+ L+LN
Sbjct: 31 FSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPL----PLKLN 86
Query: 65 DG---APKVDPKIYRSLVGSLIYLTNTRPHIVYPVSLISRFMSDPSKIHFAAAKRILRYI 121
A DP +RS+VG+L YLT TRP I Y V+++ + M +P+ F KR+LRY+
Sbjct: 87 SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYV 146
Query: 122 QGTKNHGIKYVTEDENKLVGFTDSDWAGSLDDRKSTSGYVFKLGSKVIAWASKKQKTIAL 181
+GT HG+ + + F DSDWAG R+ST+G+ LG +I+W++K+Q T++
Sbjct: 147 KGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSR 206
Query: 182 SSGEAEYIAATDASCEVVW 200
SS E EY A + E+ W
Sbjct: 207 SSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 63.2 bits (152), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 83 IYLTNTRPHIVYPVSLISRFMSDPSKIHFAAAKRILRYIQGTKNHGIKYVTEDENKLVGF 142
+YLT TRP + + V+ +S+F S A ++L Y++GT G+ Y + +L F
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 143 TDSDWAGSLDDRKSTSGYV 161
DSDWA D R+S +G+
Sbjct: 61 ADSDWASCPDTRRSVTGFC 79