BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g0530.1
(153 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G24260.1 | K-box region and MADS-box transcription factor fam... 149 2e-45
AT1G24260.3 | K-box region and MADS-box transcription factor fam... 148 3e-45
AT1G24260.2 | K-box region and MADS-box transcription factor fam... 148 3e-45
AT5G15800.1 | K-box region and MADS-box transcription factor fam... 145 5e-44
AT2G03710.3 | K-box region and MADS-box transcription factor fam... 143 5e-44
>AT1G24260.1 | K-box region and MADS-box transcription factor family
protein | Chr1:8593790-8595862 REVERSE LENGTH=250 |
201606
Length = 250
Score = 149 bits (375), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 78/120 (65%), Positives = 92/120 (76%), Gaps = 12/120 (10%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGILKKAFELSVLCDAEVALIIFSSRGKLYEFCSS 60
MGRGRVELKRIENKINRQVTFAKRRNG+LKKA+ELSVLCDAEVALIIFS+RGKLYEFCSS
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
Query: 61 SSILKTLERYQRCSSNASQASRSIKDNVHTQFMLDNLSD------LQTKEEMLQEANRSL 114
SS+L+TLERYQ+C+ A + NV ++ L LS L+ + + LQ R+L
Sbjct: 61 SSMLRTLERYQKCNYGAPEP------NVPSREALAELSSQQEYLKLKERYDALQRTQRNL 114
>AT1G24260.3 | K-box region and MADS-box transcription factor
family protein | Chr1:8593790-8595862 REVERSE
LENGTH=237 | 201606
Length = 237
Score = 148 bits (374), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 68/81 (83%), Positives = 77/81 (95%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGILKKAFELSVLCDAEVALIIFSSRGKLYEFCSS 60
MGRGRVELKRIENKINRQVTFAKRRNG+LKKA+ELSVLCDAEVALIIFS+RGKLYEFCSS
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
Query: 61 SSILKTLERYQRCSSNASQAS 81
SS+L+TLERYQ+C+ A + +
Sbjct: 61 SSMLRTLERYQKCNYGAPEPN 81
>AT1G24260.2 | K-box region and MADS-box transcription factor
family protein | Chr1:8593790-8595862 REVERSE
LENGTH=251 | 201606
Length = 251
Score = 148 bits (374), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 68/81 (83%), Positives = 77/81 (95%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGILKKAFELSVLCDAEVALIIFSSRGKLYEFCSS 60
MGRGRVELKRIENKINRQVTFAKRRNG+LKKA+ELSVLCDAEVALIIFS+RGKLYEFCSS
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
Query: 61 SSILKTLERYQRCSSNASQAS 81
SS+L+TLERYQ+C+ A + +
Sbjct: 61 SSMLRTLERYQKCNYGAPEPN 81
>AT5G15800.1 | K-box region and MADS-box transcription factor
family protein | Chr5:5151594-5153767 REVERSE
LENGTH=251 | 201606
Length = 251
Score = 145 bits (367), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 67/74 (90%), Positives = 74/74 (100%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGILKKAFELSVLCDAEVALIIFSSRGKLYEFCSS 60
MGRGRVELKRIENKINRQVTFAKRRNG+LKKA+ELSVLCDAEVALIIFS+RGKLYEFCSS
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60
Query: 61 SSILKTLERYQRCS 74
S++LKTL+RYQ+CS
Sbjct: 61 SNMLKTLDRYQKCS 74
>AT2G03710.3 | K-box region and MADS-box transcription factor family
protein | Chr2:1129622-1131242 FORWARD LENGTH=187 |
201606
Length = 187
Score = 143 bits (361), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 106/174 (60%), Gaps = 54/174 (31%)
Query: 1 MGRGRVELKRIENKINRQVTFAKRRNGILKKAFELSVLCDAEVALIIFSSRGKLYEFCSS 60
MGRG+VELKRIENKINRQVTFAKRRNG+LKKA+ELSVLCDAE+AL+IFS+RGKLYEFCSS
Sbjct: 1 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNRGKLYEFCSS 60
Query: 61 SS-ILKTLERYQRCS---SNASQASRSIKDNV--------------HTQ----------- 91
S + +T+++Y++ S + +Q+++ ++D H+Q
Sbjct: 61 PSGMARTVDKYRKHSYATMDPNQSAKDLQDKYQDYLKLKSRVEILQHSQRHLLGEELSEM 120
Query: 92 -------------------------FMLDNLSDLQTKEEMLQEANRSLNRKVSI 120
MLD LSDL+TKEEML E NR L RKV+I
Sbjct: 121 DVNELEHLERQVDASLRQIRSTKARSMLDQLSDLKTKEEMLLETNRDLRRKVAI 174