BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g0690.1
(204 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G17730.1 | vacuolar protein sorting 46.1 | Chr1:6099210-61001... 280 1e-96
AT1G73030.1 | SNF7 family protein | Chr1:27473938-27474848 FORWA... 251 2e-85
AT1G03950.1 | vacuolar protein sorting-associated protein 2.3 | ... 54 1e-08
AT2G06530.2 | SNF7 family protein | Chr2:2588740-2589807 REVERSE... 51 6e-08
AT2G06530.1 | SNF7 family protein | Chr2:2588740-2590285 REVERSE... 52 7e-08
>AT1G17730.1 | vacuolar protein sorting 46.1 | Chr1:6099210-6100153
FORWARD LENGTH=203 | 201606
Length = 203
Score = 280 bits (715), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 136/201 (67%), Positives = 167/201 (83%), Gaps = 2/201 (0%)
Query: 4 DKLFDQIFQLKITSKSLVRQAKKCEQEEKSEKIKVKKAIEKGNMDGARIYAQNAIRKRNE 63
DKL +QIF+LK TSKSL RQA+KCE+EE+SEK+KVKKAIEKGNMDGARIYA+NAIRKR+E
Sbjct: 5 DKLMNQIFELKFTSKSLQRQARKCEKEERSEKLKVKKAIEKGNMDGARIYAENAIRKRSE 64
Query: 64 QLNYLRFASRLDAVVARLGSQSNFQSIGKSMSGIVKSLEGALSVGNMEKISKTMDGFEKV 123
Q+NYLR +SRLDAVVARL +Q+ +I KSM+ IVKSLE +L+ GN++K+S+TMD FEK
Sbjct: 65 QMNYLRLSSRLDAVVARLDTQAKMATITKSMTNIVKSLESSLTTGNLQKMSETMDSFEKQ 124
Query: 124 FVNMEVQASFTEKSMEGTTSLSTPEGEVGSLMQQVADDYGLEVSMKLPSAGKETVGVKEK 183
FVNMEVQA F + +M G+TSLSTPEGEV SLMQQVADDYGLEVS+ LP + K +
Sbjct: 125 FVNMEVQAEFMDNAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAIPTKTE 184
Query: 184 GGVIASEEELSRRLAELKSKG 204
V E++L+RRLAELK++G
Sbjct: 185 EKV--EEDDLTRRLAELKARG 203
>AT1G73030.1 | SNF7 family protein | Chr1:27473938-27474848 FORWARD
LENGTH=203 | 201606
Length = 203
Score = 251 bits (641), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 138/201 (68%), Positives = 166/201 (82%), Gaps = 2/201 (0%)
Query: 4 DKLFDQIFQLKITSKSLVRQAKKCEQEEKSEKIKVKKAIEKGNMDGARIYAQNAIRKRNE 63
DKL +QIF LK TSKSL RQ++KCE+EEK+EK+KVKKAIEKGNMDGARIYA+NAIRKR+E
Sbjct: 5 DKLMNQIFDLKFTSKSLQRQSRKCEKEEKAEKLKVKKAIEKGNMDGARIYAENAIRKRSE 64
Query: 64 QLNYLRFASRLDAVVARLGSQSNFQSIGKSMSGIVKSLEGALSVGNMEKISKTMDGFEKV 123
Q+NYLR ASRLDAVVARL +Q+ +I KSM+ IVKSLE +L+ GN++K+S+TMD FEK
Sbjct: 65 QMNYLRLASRLDAVVARLDTQAKMTTITKSMTNIVKSLESSLATGNLQKMSETMDSFEKQ 124
Query: 124 FVNMEVQASFTEKSMEGTTSLSTPEGEVGSLMQQVADDYGLEVSMKLPSAGKETVGVKEK 183
FVNMEVQA F E +M G+TSLSTPEGEV SLMQQVADDYGLEVS+ LP + K +
Sbjct: 125 FVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAIPTKTE 184
Query: 184 GGVIASEEELSRRLAELKSKG 204
V E++LSRRLAELK++G
Sbjct: 185 EKV--DEDDLSRRLAELKARG 203
>AT1G03950.1 | vacuolar protein sorting-associated protein 2.3 |
Chr1:1011388-1013212 REVERSE LENGTH=210 | 201606
Length = 210
Score = 53.5 bits (127), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 10 IFQLKITSKSLVRQAKK---------------CEQEEKSEKIKVKKAIEKGNMDGARIYA 54
IF K + ++R++K+ + EEK +++K+ + GN +I A
Sbjct: 3 IFTKKPNPREVLRESKREMTQATRGIEKEIGSLQSEEKKLVLEIKRTAKSGNEGATKILA 62
Query: 55 QNAIRKRNEQLNYLRFASRLDAVVARLGSQSNFQSIGKSMSGIVKSLEGALSVGNME--K 112
+ IR R + N +++ + + S+ M G K++ A+S NM+ K
Sbjct: 63 RQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHTSVAAGMQGATKAM-AAMS-KNMDPAK 120
Query: 113 ISKTMDGFEKVFVNMEVQASFTEKSMEGTTSLSTPEGEVGSLMQQVADDYGLEVSMKLPS 172
+K M F+K M++ S++ E E L QV D+ G++++ +L S
Sbjct: 121 QAKVMREFQKQSAQMDMTTEMMSDSIDDALDNDEAEDETEDLTNQVLDEIGIDIASQLSS 180
Query: 173 AGKETVGVKEKGGVIASE-EELSRRLAELK 201
A K +G K+ V +S +EL +RLA L+
Sbjct: 181 APKGKIGGKKAEDVGSSGIDELEKRLAALR 210
>AT2G06530.2 | SNF7 family protein | Chr2:2588740-2589807 REVERSE
LENGTH=204 | 201606
Length = 204
Score = 51.2 bits (121), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 81/159 (50%)
Query: 22 RQAKKCEQEEKSEKIKVKKAIEKGNMDGARIYAQNAIRKRNEQLNYLRFASRLDAVVARL 81
R+ + + +EK ++KK ++G M ++ A++ IR R++ + + S+L V R+
Sbjct: 11 RERQGLQTQEKKLINEIKKTAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGVSLRI 70
Query: 82 GSQSNFQSIGKSMSGIVKSLEGALSVGNMEKISKTMDGFEKVFVNMEVQASFTEKSMEGT 141
+ + Q++G++M G+ K++ N+ + K M FE+ ME+ + +++
Sbjct: 71 QTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVSEVMGDAIDDA 130
Query: 142 TSLSTPEGEVGSLMQQVADDYGLEVSMKLPSAGKETVGV 180
E E L+ QV D+ G++++ +L +A V V
Sbjct: 131 LEGDEEEEETEDLVSQVLDEIGIDINQELVNAPSGAVAV 169
>AT2G06530.1 | SNF7 family protein | Chr2:2588740-2590285 REVERSE
LENGTH=225 | 201606
Length = 225
Score = 51.6 bits (122), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 81/159 (50%)
Query: 22 RQAKKCEQEEKSEKIKVKKAIEKGNMDGARIYAQNAIRKRNEQLNYLRFASRLDAVVARL 81
R+ + + +EK ++KK ++G M ++ A++ IR R++ + + S+L V R+
Sbjct: 32 RERQGLQTQEKKLINEIKKTAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGVSLRI 91
Query: 82 GSQSNFQSIGKSMSGIVKSLEGALSVGNMEKISKTMDGFEKVFVNMEVQASFTEKSMEGT 141
+ + Q++G++M G+ K++ N+ + K M FE+ ME+ + +++
Sbjct: 92 QTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVSEVMGDAIDDA 151
Query: 142 TSLSTPEGEVGSLMQQVADDYGLEVSMKLPSAGKETVGV 180
E E L+ QV D+ G++++ +L +A V V
Sbjct: 152 LEGDEEEEETEDLVSQVLDEIGIDINQELVNAPSGAVAV 190