BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g0760.1
(294 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G42170.1 | BED zinc finger and hAT dimerization domain-contai... 53 2e-07
AT3G42170.2 | BED zinc finger and hAT dimerization domain-contai... 52 2e-07
>AT3G42170.1 | BED zinc finger and hAT dimerization
domain-containing protein DAYSLEEPER |
Chr3:14321838-14323928 FORWARD LENGTH=696 | 201606
Length = 696
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 88 GYCCVTCHFLDDDWVLHKKVIAFGMILPPHSGIVLSEYIKATTLSWNIDNKLFAVAVDNA 147
GY +T H++D DW + KK++ M P + LS + W ++ KLF V ++
Sbjct: 247 GYVFITAHYIDSDWKIQKKLLNVLMESYPEADEALSLAVANCVSEWGLEGKLFNVTFNHP 306
Query: 148 TSNDVMIRNLKEWLNDKRVLVLNGDMFHMRCSAHILNLVVHDGLK 192
SN + N++ L K +L+G + C A + D L+
Sbjct: 307 ASNSA-VENIRPQLCIKNPGILDGQLVIGNCVARTFGSLAKDVLE 350
>AT3G42170.2 | BED zinc finger and hAT dimerization
domain-containing protein DAYSLEEPER |
Chr3:14321838-14323928 FORWARD LENGTH=674 | 201606
Length = 674
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 88 GYCCVTCHFLDDDWVLHKKVIAFGMILPPHSGIVLSEYIKATTLSWNIDNKLFAVAVDNA 147
GY +T H++D DW + KK++ M P + LS + W ++ KLF V ++
Sbjct: 225 GYVFITAHYIDSDWKIQKKLLNVLMESYPEADEALSLAVANCVSEWGLEGKLFNVTFNHP 284
Query: 148 TSNDVMIRNLKEWLNDKRVLVLNGDMFHMRCSAHILNLVVHDGLK 192
SN + N++ L K +L+G + C A + D L+
Sbjct: 285 ASNSA-VENIRPQLCIKNPGILDGQLVIGNCVARTFGSLAKDVLE 328