BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g0780.1
(106 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G69230.2 | SPIRAL1-like2 | Chr1:26026543-26027085 REVERSE LEN... 151 5e-49
AT1G69230.1 | SPIRAL1-like2 | Chr1:26026543-26027085 REVERSE LEN... 151 5e-49
AT1G26355.1 | SPIRAL1-like1 | Chr1:9117950-9118611 REVERSE LENGT... 144 3e-46
AT2G03680.3 | spiral1 | Chr2:1121398-1121850 FORWARD LENGTH=119 ... 107 2e-31
AT2G03680.2 | spiral1 | Chr2:1121398-1121850 FORWARD LENGTH=119 ... 107 2e-31
>AT1G69230.2 | SPIRAL1-like2 | Chr1:26026543-26027085 REVERSE
LENGTH=110 | 201606
Length = 110
Score = 151 bits (382), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 80/111 (72%), Positives = 90/111 (81%), Gaps = 6/111 (5%)
Query: 1 MGRGVSAGGGQSSLGYLFGSGEAPKSAAPAAQPAESE-----PPKKSAATSQQVDVSKQI 55
MGRGVSAGGGQSSLGYLFGSGEAPK AA PAE+E PP ++AA + VD KQ+
Sbjct: 1 MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAA-ANAVDSIKQV 59
Query: 56 PAGIHGNPANNYHRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFGGSSK 106
PAG++ N ANNY RA+GQNTGNF+TDRPSTKVH+APGGGSSLDYLFGG S
Sbjct: 60 PAGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGGGSN 110
>AT1G69230.1 | SPIRAL1-like2 | Chr1:26026543-26027085 REVERSE
LENGTH=110 | 201606
Length = 110
Score = 151 bits (382), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 80/111 (72%), Positives = 90/111 (81%), Gaps = 6/111 (5%)
Query: 1 MGRGVSAGGGQSSLGYLFGSGEAPKSAAPAAQPAESE-----PPKKSAATSQQVDVSKQI 55
MGRGVSAGGGQSSLGYLFGSGEAPK AA PAE+E PP ++AA + VD KQ+
Sbjct: 1 MGRGVSAGGGQSSLGYLFGSGEAPKLAAVNKTPAETESSAHAPPTQAAA-ANAVDSIKQV 59
Query: 56 PAGIHGNPANNYHRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFGGSSK 106
PAG++ N ANNY RA+GQNTGNF+TDRPSTKVH+APGGGSSLDYLFGG S
Sbjct: 60 PAGLNSNSANNYMRAEGQNTGNFITDRPSTKVHSAPGGGSSLDYLFGGGSN 110
>AT1G26355.1 | SPIRAL1-like1 | Chr1:9117950-9118611 REVERSE
LENGTH=113 | 201606
Length = 113
Score = 144 bits (364), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 79/110 (71%), Positives = 89/110 (80%), Gaps = 8/110 (7%)
Query: 1 MGRGVSAGGGQSSLGYLFGSGEAPKSA-----APAAQ--PAESEPPKKSAATSQQVDVSK 53
MGRGVS GGGQSSLGYLFGSGEAPK A AP+++ P ++P K A +Q V+V+K
Sbjct: 1 MGRGVSVGGGQSSLGYLFGSGEAPKPAINNAPAPSSETLPISADPSPKHVA-AQTVNVTK 59
Query: 54 QIPAGIHGNPANNYHRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFGG 103
QIPAGI+ + NNY RADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFGG
Sbjct: 60 QIPAGINKSSTNNYIRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFGG 109
>AT2G03680.3 | spiral1 | Chr2:1121398-1121850 FORWARD LENGTH=119 |
201606
Length = 119
Score = 107 bits (268), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 72/118 (61%), Gaps = 16/118 (13%)
Query: 1 MGRGVSAGGGQSSLGYLFG---------------SGEAPKSAAPAAQPAESEPPKKSAAT 45
MGRG S GGGQSSL YLFG E+ AP + + +
Sbjct: 1 MGRGNSCGGGQSSLDYLFGGDAPAPKPVPAPRPAPTESNNGPAPPVTAVTATALTTATTS 60
Query: 46 SQQVDVSKQIPAGIHGNPANNYHRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFGG 103
+ +++KQIPAGI P NNY RA+GQNTGNFLTDRPSTKVHAAPGGGSSLDYLF G
Sbjct: 61 VEPAELNKQIPAGIK-TPVNNYARAEGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFTG 117
>AT2G03680.2 | spiral1 | Chr2:1121398-1121850 FORWARD LENGTH=119 |
201606
Length = 119
Score = 107 bits (268), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 72/118 (61%), Gaps = 16/118 (13%)
Query: 1 MGRGVSAGGGQSSLGYLFG---------------SGEAPKSAAPAAQPAESEPPKKSAAT 45
MGRG S GGGQSSL YLFG E+ AP + + +
Sbjct: 1 MGRGNSCGGGQSSLDYLFGGDAPAPKPVPAPRPAPTESNNGPAPPVTAVTATALTTATTS 60
Query: 46 SQQVDVSKQIPAGIHGNPANNYHRADGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFGG 103
+ +++KQIPAGI P NNY RA+GQNTGNFLTDRPSTKVHAAPGGGSSLDYLF G
Sbjct: 61 VEPAELNKQIPAGIK-TPVNNYARAEGQNTGNFLTDRPSTKVHAAPGGGSSLDYLFTG 117