BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g0790.1
(280 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G24380.1 | no-apical-meristem-associated carboxy-terminal dom... 124 2e-33
AT4G10230.1 | no-apical-meristem-associated carboxy-terminal dom... 116 9e-31
AT1G66235.1 | no-apical-meristem-associated carboxy-terminal dom... 100 8e-25
AT1G66235.2 | no-apical-meristem-associated carboxy-terminal dom... 71 2e-14
AT2G13760.1 | no-apical-meristem-associated carboxy-terminal dom... 62 2e-11
>AT1G24380.1 | no-apical-meristem-associated carboxy-terminal domain
protein | Chr1:8646625-8647609 FORWARD LENGTH=293 |
201606
Length = 293
Score = 124 bits (310), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 121/238 (50%), Gaps = 39/238 (16%)
Query: 9 RSDRSLDARFRTISTAVSKFRGCVRQIENRNQSGTNEIDTLQSARTLYLQEDAKQKGFQF 68
R RSL R +I +AVSK RGCV QIEN+N SG +E D L A+ L Q + ++GF+F
Sbjct: 12 RPKRSLQTRMTSILSAVSKLRGCVNQIENKNPSGASEEDILNQAKMLLTQYEKYKRGFKF 71
Query: 69 DHVWPILKDCEKFAVAGPKR----------INLMNSFNETQIGTPPSGSPGLPFSVNLDE 118
DHVWPILK EKFA K + +SF+ I T S SPG+ S++L+
Sbjct: 72 DHVWPILKGIEKFANDNMKTPAAFQGEGRDVTSSSSFS---INTESSPSPGMN-SIDLNM 127
Query: 119 DDNQTTPESYSRPTGRKKEKMRKRVDEEKTKDVARMHNRSDEAIEIMRRTETARIERNAR 178
D SRP G KK K RK+ EE+ K + +E+N
Sbjct: 128 DSEDANFSLSSRPMGLKKAK-RKQQSEEQFKQL---------------------LEQN-- 163
Query: 179 KDKLMDAINKRNDKERAVEMARISYERKKMEYDVMHMDVNTITDPIRQAYFRREQQQL 236
DKL+ AI K + ++ +I R K E ++ D+N+I+DP AY E++++
Sbjct: 164 -DKLIKAITKGTSERNEIQRQKIEVARMKEENKILFADLNSISDPSSSAYIENERKRI 220
>AT4G10230.1 | no-apical-meristem-associated carboxy-terminal domain
protein | Chr4:6366261-6367185 FORWARD LENGTH=273 |
201606
Length = 273
Score = 116 bits (290), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/227 (35%), Positives = 117/227 (51%), Gaps = 39/227 (17%)
Query: 20 TISTAVSKFRGCVRQIENRNQSGTNEIDTLQSARTLYLQEDAKQKGFQFDHVWPILKDCE 79
+I +AVSK RGCV QIEN+N SG +E D L A+ L Q + ++GF+FDHVWPILK E
Sbjct: 3 SILSAVSKLRGCVNQIENKNPSGASEEDILNQAKMLLTQYEKYKRGFKFDHVWPILKGIE 62
Query: 80 KFAVAGPKR----------INLMNSFNETQIGTPPSGSPGLPFSVNLDEDDNQTTPESYS 129
KFA K + +SF+ I T S SPG+ S++L+ D S
Sbjct: 63 KFANDNMKTPPAFQGEGRDVTSSSSFS---INTESSPSPGMN-SIDLNMDSEDANFSLSS 118
Query: 130 RPTGRKKEKMRKRVDEEKTKDVARMHNRSDEAIEIMRRTETARIERNARKDKLMDAINKR 189
RP G KK K RK+ EE+ K + +E+N DKL+ AI K
Sbjct: 119 RPMGLKKAK-RKQQSEEQFKQL---------------------LEQN---DKLIKAITKG 153
Query: 190 NDKERAVEMARISYERKKMEYDVMHMDVNTITDPIRQAYFRREQQQL 236
+ ++ +I R K E ++ D+N+I+DP +AY E++++
Sbjct: 154 TSERNEIQRQKIEVARMKEENKILFADLNSISDPSSRAYVENERKRI 200
>AT1G66235.1 | no-apical-meristem-associated carboxy-terminal domain
protein | Chr1:24683006-24683931 REVERSE LENGTH=284 |
201606
Length = 284
Score = 100 bits (250), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 117/234 (50%), Gaps = 28/234 (11%)
Query: 9 RSDRSLDARFRTISTAVSKFRGCVRQIENRNQSGTNEIDTLQSARTLYLQEDAKQKGFQF 68
RS +SL R +TI A K C++ ENR SG + D A+ + +Q+ + G++F
Sbjct: 56 RSKKSLQCRLQTIEKASKKLHACIKLCENRRSSGASSDDIFNQAKEMLMQDKHFKSGWKF 115
Query: 69 DHVWPILKDCEKF---AVAGPKRINLMNSFNETQIGTPPSGSPGLPFSVNLDEDDNQTTP 125
DHVW I+++ EKF A K +NL N T + S FS+NLD++D+
Sbjct: 116 DHVWNIIRNFEKFKDGATQAKKVLNLCGLENPTLDSVSQASSGSFSFSLNLDDEDDIIGR 175
Query: 126 ESYSRPTGRKKEKMRKRVDEEKTKDVARMHNRSDEAIEIMRRTETARIERNARKDKLMDA 185
Y RP KK K+++ ++D+ +++++ E +LM+
Sbjct: 176 SPYQRPIRVKKSKLKR---------------KNDQILDVIKTFEEG-------NKQLMEQ 213
Query: 186 INKRN-DKERAVEM--ARISYERKKMEYDVMHMDVNTITDPIRQAYFRREQQQL 236
+ K + +++ +EM ++ +K E V++ ++N+I DP +AY + EQ ++
Sbjct: 214 LKKTSAQRQQYLEMQSKSLALREQKEENKVLYRNLNSIEDPNLRAYLQSEQAKI 267
>AT1G66235.2 | no-apical-meristem-associated carboxy-terminal domain
protein | Chr1:24683006-24683705 REVERSE LENGTH=202 |
201606
Length = 202
Score = 70.9 bits (172), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 101/204 (49%), Gaps = 30/204 (14%)
Query: 41 SGTNEIDTL--QSARTLYLQEDAKQKGFQFDHVWPILKDCEKF---AVAGPKRINLMNSF 95
S +ID L A+ + +Q+ + G++FDHVW I+++ EKF A K +NL
Sbjct: 4 SNYVKIDVLVFNQAKEMLMQDKHFKSGWKFDHVWNIIRNFEKFKDGATQAKKVLNLCGLE 63
Query: 96 NETQIGTPPSGSPGLPFSVNLDEDDNQTTPESYSRPTGRKKEKMRKRVDEEKTKDVARMH 155
N T + S FS+NLD++D+ Y RP KK K+++
Sbjct: 64 NPTLDSVSQASSGSFSFSLNLDDEDDIIGRSPYQRPIRVKKSKLKR-------------- 109
Query: 156 NRSDEAIEIMRRTETARIERNARKDKLMDAINKRN-DKERAVEM--ARISYERKKMEYDV 212
++D+ +++++ E +LM+ + K + +++ +EM ++ +K E V
Sbjct: 110 -KNDQILDVIKTFEEGN-------KQLMEQLKKTSAQRQQYLEMQSKSLALREQKEENKV 161
Query: 213 MHMDVNTITDPIRQAYFRREQQQL 236
++ ++N+I DP +AY + EQ ++
Sbjct: 162 LYRNLNSIEDPNLRAYLQSEQAKI 185
>AT2G13760.1 | no-apical-meristem-associated carboxy-terminal domain
protein | Chr2:5734955-5735644 REVERSE LENGTH=209 |
201606
Length = 209
Score = 62.4 bits (150), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 47/182 (25%)
Query: 55 LYLQEDAKQKGFQFDHVWPILKDCEKFAVAGPKRINLMNSFNETQIGTPPSGSPGLPFSV 114
L Q + ++GF+FDHVWPILK EKFA N+ + S SPG+ S+
Sbjct: 2 LLTQYEKYKRGFKFDHVWPILKGIEKFA-------------NDNMMTPASSPSPGMN-SI 47
Query: 115 NLDEDDNQTTPESYSRPTGRKKEKMRKRVDEEKTKDVARMHNRSDEAIEIMRRTETARIE 174
+L+ D SRP G KK K+++ +++
Sbjct: 48 DLNMDSEDANFSLSSRPMGLKKTKLKQLLEQ----------------------------- 78
Query: 175 RNARKDKLMDAINKRNDKERAVEMARISYERKKMEYDVMHMDVNTITDPIRQAYFRREQQ 234
DKL+ AI K + ++ +I +R K E ++ D+N+I+DP +AY E++
Sbjct: 79 ----NDKLIKAITKGTSERNEIQRQKIEVDRMKEENKILFADLNSISDPSSRAYIENERK 134
Query: 235 QL 236
++
Sbjct: 135 RI 136