BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g0800.1
(236 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G13770.1 | nuclease | Chr2:5736603-5737847 FORWARD LENGTH=343... 174 5e-53
AT3G22935.1 | hypothetical protein | Chr3:8130391-8131130 FORWAR... 92 3e-23
AT3G55350.1 | PIF / Ping-Pong family of plant transposase | Chr3... 51 2e-07
>AT2G13770.1 | nuclease | Chr2:5736603-5737847 FORWARD LENGTH=343 |
201606
Length = 343
Score = 174 bits (442), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 89/163 (54%), Positives = 105/163 (64%), Gaps = 2/163 (1%)
Query: 46 AYFGIPGSNNDINVLQSSNLFANLAEGKTPPVKYNIMGKEYDTGYYLADGIYPKWSTLVQ 105
Y P +N+ +L AEG PP Y I GK Y+ GYYLADGIYPKWSTLVQ
Sbjct: 181 CYLRSPDANDVARLLHIGESRGFPAEGTAPPASYVINGKPYNMGYYLADGIYPKWSTLVQ 240
Query: 106 TISQPQGLKKQHFAMMQEACRKDVERAFGVLQARFEIVKDPARFWDKNVLSDIMFACIIM 165
TI P+G KK+ FAM QEACRKDVERAFGVLQ RF IV P+R W+K VL DIM +CIIM
Sbjct: 241 TIHDPRGPKKKLFAMKQEACRKDVERAFGVLQLRFAIVAGPSRLWNKTVLHDIMTSCIIM 300
Query: 166 HNMVVEDEYGDRTVPQIFSEIPT--VEVVENEAERFARFLAMH 206
HNM++EDE + E+P VE+ ++ RF FLA H
Sbjct: 301 HNMIIEDERDIDAPIEERVEVPIEEVEMTGDDDTRFQEFLARH 343
>AT3G22935.1 | hypothetical protein | Chr3:8130391-8131130 FORWARD
LENGTH=157 | 201606
Length = 157
Score = 92.4 bits (228), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Query: 143 VKDPARFWDKNVLSDIMFACIIMHNMVVEDEYGDRTVPQIFSEIPT--VEVVENEAERFA 200
V P+R W+K +L DIM +CIIMHNM++EDE + E+P VE+ ++ RF
Sbjct: 63 VTGPSRLWNKTILHDIMTSCIIMHNMIIEDERDIDAPIEERVEVPIEEVEMTGDDDTRFQ 122
Query: 201 RFLAMHKQIKDKKAHFELRDTLIDHLWEKKGNDE 234
FLA H+QIKD++AH ELR+ LI HLW + N E
Sbjct: 123 EFLARHRQIKDREAHIELRNALIKHLWSQYTNSE 156
>AT3G55350.1 | PIF / Ping-Pong family of plant transposase |
Chr3:20518518-20520690 FORWARD LENGTH=406 | 201606
Length = 406
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 14/152 (9%)
Query: 30 TIILEAVASYDLWIWHAYFGIPGSNNDINVLQSSNLFANLAEGK-----TPPVKYNIMGK 84
++ L+AV D+ G PGS ND VL++S + + +GK P+ +
Sbjct: 214 SMTLQAVVDPDMRFLDVIAGWPGSLNDDVVLKNSGFYKLVEKGKRLNGEKLPLSERTELR 273
Query: 85 EY---DTGYYLADGIYPKWSTLVQTISQPQGLKKQHFAMMQEACRKDVERAFGVLQARFE 141
EY D+G+ L + L +P L + F K + A L+ R+
Sbjct: 274 EYIVGDSGFPLLPWL------LTPYQGKPTSLPQTEFNKRHSEATKAAQMALSKLKDRWR 327
Query: 142 IVKDPARFWDKNVLSDIMFACIIMHNMVVEDE 173
I+ D+N L I+F C ++HN++++ E
Sbjct: 328 IINGVMWMPDRNRLPRIIFVCCLLHNIIIDME 359