BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000118.1_g0860.1
(368 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 57 2e-08
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 4/152 (2%)
Query: 221 QRAKPKWVQNGDRNTKVFHVAMSTRRQKNTIHQLTRSLGQTTQDTKVISNEFIAYFKNLF 280
Q+++ KW+Q+GD NT+ FH + + KN I L ++ + +AY+ +L
Sbjct: 437 QKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTHLL 496
Query: 281 EAEPVSQPPTE---ILNAYKVLTTEQLGY-ISRVPTPEEIKDVVMKMGSIKSSGPKGLPC 336
++ P I + + + L +S +P+ +EI V M K+ GP
Sbjct: 497 GSDSDILTPDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSFTA 556
Query: 337 YFFQHNWDVVGAELISHIQTTFISGSIDPSLN 368
FF +W VV I+ ++ F +G + N
Sbjct: 557 EFFWESWFVVKDSTIAAVKEFFRTGHLLKRFN 588